RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 HERC6Q8IVU3 1022 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 FAM126BQ8IXS8 530 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 STK40Q8N2I9 435 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 GALNT4Q8N4A0 578 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 TTC30BQ8N4P2 665 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 CCT7Q99832 543 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 KLF16Q9BXK1 252 aaPredicted RBP22.19■■□□□ 1.14
PNKP-201ENST00000322344 UBAP1Q9NZ09 502 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 TMCC1O94876 653 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 ESR1P03372 595 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 HSD17B1P14061 328 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 PTGER3P43115 390 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 ARF5P84085 180 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 TRAF2Q12933 501 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 ZRANB3Q5FWF4 1079 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 FAM219BQ5XKK7 198 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 PIANPQ8IYJ0 282 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 EFHBQ8N7U6 833 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 GOLM1Q8NBJ4 401 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 SPDYE1Q8NFV5 336 aaPredicted RBP22.19■■□□□ 1.14
PNKP-201ENST00000322344 OR56A4Q8NGH8 313 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 OR2T34Q8NGX1 318 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 OR2T3Q8NH03 318 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 SLCO4A1Q96BD0 722 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 ZBED2Q9BTP6 218 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 ZNF696Q9H7X3 374 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 GKN1Q9NS71 199 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 PCTPQ9UKL6 214 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 BTRCQ9Y297 605 aa22.19■■□□□ 1.14
PNKP-201ENST00000322344 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.18■■□□□ 1.14
PNKP-201ENST00000322344 KIF3CO14782 793 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 TSPAN3O60637 253 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 SNX2O60749 519 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 TSPAN12O95859 305 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 SMIM18P0DKX4 95 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 CAPN3P20807 821 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 GRIA2P42262 883 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 ALDH7A1P49419 539 aaKnown RBP22.18■■□□□ 1.14
PNKP-201ENST00000322344 CDKN1CP49918 316 aaPredicted RBP22.18■■□□□ 1.14
PNKP-201ENST00000322344 ROR2Q01974 943 aaKnown RBP22.18■■□□□ 1.14
PNKP-201ENST00000322344 CNPY1Q3B7I2 92 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 INO80DQ53TQ3 878 aaPredicted RBP22.18■■□□□ 1.14
PNKP-201ENST00000322344 CTSL3PQ5NE16 218 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 BLOC1S3Q6QNY0 202 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 REM2Q8IYK8 340 aaPredicted RBP22.18■■□□□ 1.14
PNKP-201ENST00000322344 LRTOMTQ8WZ04 291 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 ARMC1Q9NVT9 282 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 GIMAP2Q9UG22 337 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 STOML2Q9UJZ1 356 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 GPR45Q9Y5Y3 372 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 SLC4A7Q9Y6M7 1214 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 AQP12BA6NM10 295 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 GIPC1O14908 333 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 LATS1O95835 1130 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 FAM58BPP0C7Q3 252 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 RPL17P18621 184 aaKnown RBP22.18■■□□□ 1.14
PNKP-201ENST00000322344 PPP3CCP48454 512 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 POLE2P56282 527 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 NME5P56597 212 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 TCTN1Q2MV58 587 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 VPS26BQ4G0F5 336 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 CYP2R1Q6VVX0 501 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 C16orf59Q7L2K0 433 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 GPSM1Q86YR5 675 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 AQP12AQ8IXF9 295 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 SIDT2Q8NBJ9 832 aaKnown RBP22.18■■□□□ 1.14
PNKP-201ENST00000322344 CD200R1Q8TD46 325 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 NCSTNQ92542 709 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 LINGO1Q96FE5 620 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 TRMT2BQ96GJ1 504 aaKnown RBP22.18■■□□□ 1.14
PNKP-201ENST00000322344 ZNF597Q96LX8 424 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 CNBD2Q96M20 576 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 HGH1Q9BTY7 390 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 TMEM45AQ9NWC5 275 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 GALPQ9UBC7 116 aa22.18■■□□□ 1.14
PNKP-201ENST00000322344 GOLGA8CPA6NN73 597 aa22.17■■□□□ 1.14
PNKP-201ENST00000322344 NIPSNAP2O75323 286 aa22.17■■□□□ 1.14
PNKP-201ENST00000322344 IRF1P10914 325 aa22.17■■□□□ 1.14
PNKP-201ENST00000322344 TAF12Q16514 161 aa22.17■■□□□ 1.14
PNKP-201ENST00000322344 XKR7Q5GH72 579 aa22.17■■□□□ 1.14
PNKP-201ENST00000322344 SYVN1Q86TM6 617 aa22.17■■□□□ 1.14
PNKP-201ENST00000322344 ZFRQ96KR1 1074 aaKnown RBP22.17■■□□□ 1.14
PNKP-201ENST00000322344 SLC30A3Q99726 388 aa22.17■■□□□ 1.14
PNKP-201ENST00000322344 SLC39A3Q9BRY0 314 aa22.17■■□□□ 1.14
PNKP-201ENST00000322344 MRPS26Q9BYN8 205 aaKnown RBP22.17■■□□□ 1.14
PNKP-201ENST00000322344 SLC2A11Q9BYW1 496 aa22.17■■□□□ 1.14
PNKP-201ENST00000322344 AIG1Q9NVV5 245 aa22.17■■□□□ 1.14
PNKP-201ENST00000322344 CNOT6Q9ULM6 557 aaKnown RBP22.17■■□□□ 1.14
PNKP-201ENST00000322344 E5RI56 91 aa22.16■■□□□ 1.14
PNKP-201ENST00000322344 NME4O00746 187 aa22.16■■□□□ 1.14
PNKP-201ENST00000322344 SEC24AO95486 1093 aa22.16■■□□□ 1.14
PNKP-201ENST00000322344 CD160O95971 181 aa22.16■■□□□ 1.14
PNKP-201ENST00000322344 C1RP00736 705 aa22.16■■□□□ 1.14
PNKP-201ENST00000322344 GNRH1P01148 92 aa22.16■■□□□ 1.14
PNKP-201ENST00000322344 RPL5P46777 297 aaKnown RBP22.16■■□□□ 1.14
PNKP-201ENST00000322344 CDKL1Q00532 357 aa22.16■■□□□ 1.14
PNKP-201ENST00000322344 C6orf52Q5T4I8 152 aa22.16■■□□□ 1.14
PNKP-201ENST00000322344 TPGS2Q68CL5 300 aa22.16■■□□□ 1.14
PNKP-201ENST00000322344 KIAA1841Q6NSI8 718 aa22.16■■□□□ 1.14
PNKP-201ENST00000322344 RNF168Q8IYW5 571 aaPredicted RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms