RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 AZGP1P25311 298 aaKnown RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 MAZP56270 477 aaKnown RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 PPP4CP60510 307 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 FOXM1Q08050 763 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 Q3C1V9 767 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 SLC43A3Q8NBI5 491 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 DCAKDQ8WVC6 231 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 AGO4Q9HCK5 861 aaKnown RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 KMOO15229 486 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 CTSKP43235 329 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 TDRD10Q5VZ19 366 aaKnown RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 GJD3Q8N144 294 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 C4orf32Q8N8J7 132 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 OR52K1Q8NGK4 314 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 TNFRSF25Q93038 417 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 DNAJC11Q9NVH1 559 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 ARMC1Q9NVT9 282 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 ADAMTS6Q9UKP5 1117 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 FABP12A6NFH5 140 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 C12orf71A8MTZ7 269 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 OR6B1O95007 311 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 MOCS2O96007 188 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 KCTD19Q17RG1 926 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 DET1Q7L5Y6 550 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 OTOP1Q7RTM1 612 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 SLITRK4Q8IW52 837 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 SCUBE3Q8IX30 993 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 ZNF34Q8IZ26 560 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 CPT1BQ92523 772 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 ARMC7Q9H6L4 198 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 MAN2B2Q9Y2E5 1009 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 FADS2P1A8MWK0 482 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 CYB561D2O14569 222 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 FGF10O15520 208 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 FABP3P05413 133 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 MBL2P11226 248 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 PCSK2P16519 638 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 SLC6A3Q01959 620 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 PPP3CAQ08209 521 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 FSTL4Q6MZW2 842 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 SLC26A9Q7LBE3 791 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 DCP2Q8IU60 420 aaKnown RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 SPATA2LQ8IUW3 424 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 ZZZ3Q8IYH5 903 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 SCML4Q8N228 414 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 LPGAT1Q92604 370 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 CIDECQ96AQ7 238 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 HTATIP2Q9BUP3 242 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 NT5MQ9NPB1 228 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 PDP1Q9P0J1 537 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 ZC3H4Q9UPT8 1303 aaKnown RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 TEX51A0A1B0GUA7 166 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 ARHGEF15O94989 841 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 ASB12Q8WXK4 309 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 RFKQ969G6 155 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 C11orf24Q96F05 449 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 EBF4Q9BQW3 602 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 CHMP1AQ9HD42 196 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 SEMA4BQ9NPR2 832 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 RDH8Q9NYR8 311 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 ACTR3BQ9P1U1 418 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 SLITRK5O94991 958 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 NR2F6P10588 404 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 XRCC1P18887 633 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 DEFA5Q01523 94 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 LSM12Q3MHD2 195 aaKnown RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 ARL13AQ5H913 290 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 LLGL2Q6P1M3 1020 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 NPNTQ6UXI9 565 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 OR52L1Q8NGH7 329 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 TEX47Q8TBZ9 253 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 KAT5Q92993 513 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 MED8Q96G25 268 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 KCNS3Q9BQ31 491 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 FAM49AQ9H0Q0 323 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 SACM1LQ9NTJ5 587 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 SNTG2Q9NY99 539 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 SLAIN2Q9P270 581 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 RAB23Q9ULC3 237 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 MED13LQ71F56 2210 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 LOC100130705A0A1B0GUX0 176 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ELOVL7A1L3X0 281 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ZNF879B4DU55 563 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 NR4A1P22736 598 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 GSTM2P28161 218 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 RPL3P39023 403 aaKnown RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 RHBDL3P58872 404 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ANKS6Q68DC2 871 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ERMP1Q7Z2K6 904 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 AKAP1Q92667 903 aaKnown RBP eCLIP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 HAVCR1Q96D42 359 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ZNF486Q96H40 463 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 PWWP2AQ96N64 755 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ARHGAP28Q9P2N2 729 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 XPR1Q9UBH6 696 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 OPTCQ9UBM4 332 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 LYVE1Q9Y5Y7 322 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 GJA3Q9Y6H8 435 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 A0A088AWK7 358 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms