RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 GPRIN1Q7Z2K8 1008 aa17.79■□□□□ 0.44
PRKCB-202ENST00000321728 TFAP2DQ7Z6R9 452 aa17.79■□□□□ 0.44
PRKCB-202ENST00000321728 KLHDC8BQ8IXV7 354 aa17.79■□□□□ 0.44
PRKCB-202ENST00000321728 HDAC2Q92769 488 aaKnown RBP17.79■□□□□ 0.44
PRKCB-202ENST00000321728 MRGPRX2Q96LB1 330 aa17.79■□□□□ 0.44
PRKCB-202ENST00000321728 PSD2Q9BQI7 771 aa17.79■□□□□ 0.44
PRKCB-202ENST00000321728 AKIP1Q9NQ31 210 aa17.79■□□□□ 0.44
PRKCB-202ENST00000321728 VPS51Q9UID3 782 aa17.79■□□□□ 0.44
PRKCB-202ENST00000321728 ENPP5Q9UJA9 477 aa17.79■□□□□ 0.44
PRKCB-202ENST00000321728 GPR45Q9Y5Y3 372 aa17.79■□□□□ 0.44
PRKCB-202ENST00000321728 CNMDO75829 334 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 INMTO95050 263 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 HTR1AP08908 422 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 RPS12P25398 132 aaKnown RBP17.78■□□□□ 0.44
PRKCB-202ENST00000321728 ECT2LQ008S8 904 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 SLC14A2Q15849 920 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 KANK2Q63ZY3 851 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 PROSER1Q86XN7 944 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 ANKRD13BQ86YJ7 626 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 SDCCAG3Q96C92 435 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 ASB2Q96Q27 587 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 PCDHB3Q9Y5E6 796 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 SMIM28A0A1B0GU29 152 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 CCDC162PA2VCL2 907 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 PFDN6O15212 129 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 TBC1D4O60343 1298 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 GMNNO75496 209 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 C6orf141Q5SZD1 244 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 RANBP10Q6VN20 620 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 ZDHHC13Q8IUH4 622 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 CILP2Q8IUL8 1156 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 CCDC117Q8IWD4 279 aaPredicted RBP17.78■□□□□ 0.44
PRKCB-202ENST00000321728 ATP13A3Q9H7F0 1226 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 TIMM22Q9Y584 194 aa17.78■□□□□ 0.44
PRKCB-202ENST00000321728 MAN1A2O60476 641 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 MYO1DO94832 1006 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 C1RP00736 705 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 F9P00740 461 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 CYBBP04839 570 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 UGT2B4P06133 528 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 CDH1P12830 882 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 UFM1P61960 85 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 RCAN2Q14206 197 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 KCTD2Q14681 263 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 MAPK11Q15759 364 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 INAQ16352 499 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 PHKG1Q16816 387 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 SV2CQ496J9 727 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 FBXO48Q5FWF7 155 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 AGAP7PQ5VUJ5 663 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 TTC23Q5W5X9 447 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 DSG4Q86SJ6 1040 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 RIMKLAQ8IXN7 391 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 ZCCHC7Q8N3Z6 543 aaKnown RBP17.77■□□□□ 0.44
PRKCB-202ENST00000321728 MINDY2Q8NBR6 621 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 ZNF555Q8NEP9 628 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 S100ZQ8WXG8 99 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 IL12RB2Q99665 862 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 SMURF2Q9HAU4 748 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 RGS18Q9NS28 235 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 M0R3G1 203 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 UPK1AO00322 258 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 UGT2B11O75310 529 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 PNPLA4P41247 253 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 MTHFRP42898 656 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 WNT3AP56704 352 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 LSM3P62310 102 aaKnown RBP17.77■□□□□ 0.44
PRKCB-202ENST00000321728 NFKB2Q00653 900 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 MAPRE1Q15691 268 aaKnown RBP17.77■□□□□ 0.44
PRKCB-202ENST00000321728 CTF1Q16619 201 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 DPY19L1Q2PZI1 675 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 PAGE2BQ5JRK9 111 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 HABP4Q5JVS0 413 aaKnown RBP17.77■□□□□ 0.44
PRKCB-202ENST00000321728 APOBEC3FQ8IUX4 373 aaKnown RBP17.77■□□□□ 0.44
PRKCB-202ENST00000321728 CHDHQ8NE62 594 aaPredicted RBP17.77■□□□□ 0.44
PRKCB-202ENST00000321728 OR7A2PQ8NGA2 310 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 ITFG1Q8TB96 612 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 MUL1Q969V5 352 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 PABPC5Q96DU9 382 aaKnown RBP17.77■□□□□ 0.44
PRKCB-202ENST00000321728 MAGEE1Q9HCI5 957 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 SEMA4BQ9NPR2 832 aaPredicted RBP17.77■□□□□ 0.44
PRKCB-202ENST00000321728 FAM118AQ9NWS6 357 aa17.77■□□□□ 0.44
PRKCB-202ENST00000321728 LEF1Q9UJU2 399 aaPredicted RBP17.77■□□□□ 0.44
PRKCB-202ENST00000321728 A0A1B0GTL3 188 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 MATN3O15232 486 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 NOBOXO60393 691 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 EEDO75530 441 aaKnown RBP17.76■□□□□ 0.43
PRKCB-202ENST00000321728 SLC22A3O75751 556 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 AGXTP21549 392 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 HTR1EP28566 365 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 GSSP48637 474 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 CXCR3P49682 368 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 IST1P53990 364 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 SOX4Q06945 474 aaPredicted RBP17.76■□□□□ 0.43
PRKCB-202ENST00000321728 INAVAQ3KP66 663 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 C6orf183Q5T699 404 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 WSCD1Q658N2 575 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 POLE4Q9NR33 117 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 POLR3BQ9NW08 1133 aaPredicted RBP17.76■□□□□ 0.43
PRKCB-202ENST00000321728 SCHIP1Q9P0W5 487 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms