RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 SCML4Q8N228 414 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 ARRDC2Q8TBH0 407 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 ADAMTS16Q8TE57 1224 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 FUBP3Q96I24 572 aaKnown RBP eCLIP15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 SLC45A3Q96JT2 553 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 C1orf74Q96LT6 269 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 MARCH5Q9NX47 278 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 CCDC167Q9P0B6 97 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 SRRDQ9UH36 339 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 F5H5T6 163 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 GPR39O43194 453 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 VNN2O95498 520 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 OXSR1O95747 527 aaPredicted RBP15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 GOT2P00505 430 aaKnown RBP15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 TACR2P21452 398 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 YAP1P46937 504 aaKnown RBP15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 KCNC4Q03721 635 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 ZNF33AQ06730 810 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 NR1D2Q14995 579 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 TRIP4Q15650 581 aaPredicted RBP15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 PPP4R4Q6NUP7 873 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 ZNF683Q8IZ20 524 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 CBR4Q8N4T8 237 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 CANT1Q8WVQ1 401 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 DOK1Q99704 481 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 MRPL57Q9BQC6 102 aaKnown RBP15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 RBMX2Q9Y388 322 aaKnown RBP15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 PCDHGC4Q9Y5F7 938 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 CCDC162PA2VCL2 907 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 A8MT66 165 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 TARM1B6A8C7 271 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 ATF6P18850 670 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 SOX11P35716 441 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 HADHAP40939 763 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 SGSHP51688 502 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 TRAF2Q12933 501 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 SEMA3AQ14563 771 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 TAF12Q16514 161 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 KIAA1841Q6NSI8 718 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 SLC2A7Q6PXP3 512 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 BEND5Q7L4P6 421 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 FBXL20Q96IG2 436 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 SLC39A3Q9BRY0 314 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 POLR1BQ9H9Y6 1135 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 TMEM161AQ9NX61 479 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 NLRC5Q86WI3 1866 aa15.47■□□□□ 0.07
SHROOM1-201ENST00000319854 TCRBV3S1A0A5B6 114 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 ZNF701M0R085 212 aaPredicted RBP15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 CAPN15O75808 1086 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 DNAJB2P25686 324 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 DCKP27707 260 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 SLC7A1P30825 629 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 C1QTNF8P60827 252 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 POU4F1Q01851 419 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 SERINC3Q13530 473 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 FAM26DQ5JW98 314 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 C6orf10Q5SRN2 563 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 SPOUT1Q5T280 376 aaKnown RBP15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 AGAP9Q5VTM2 703 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 NIPAL1Q6NVV3 410 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 EPHX4Q8IUS5 362 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 CNTN4Q8IWV2 1026 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 OFCC1Q8IZS5 231 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 KDM1BQ8NB78 822 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 ACDQ96AP0 544 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 PRKD2Q9BZL6 878 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 POLR1EQ9GZS1 481 aaKnown RBP15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 FBRSL1Q9HCM7 1045 aaKnown RBP15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 PTPRDP23468 1912 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 TRIM24O15164 1050 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 CDKN1CP49918 316 aaPredicted RBP15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 BTLAQ7Z6A9 289 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 DCBLD1Q8N8Z6 715 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 OR9I1Q8NGQ6 314 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 ESAMQ96AP7 390 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 SOX17Q9H6I2 414 aaPredicted RBP15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 SARS2Q9NP81 518 aaKnown RBP15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 SACM1LQ9NTJ5 587 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 SUCOQ9UBS9 1254 aaKnown RBP15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 TSC22D4Q9Y3Q8 395 aa15.46■□□□□ 0.07
SHROOM1-201ENST00000319854 LDB2O43679 373 aa15.46■□□□□ 0.06
SHROOM1-201ENST00000319854 RPLP2P05387 115 aaKnown RBP15.46■□□□□ 0.06
SHROOM1-201ENST00000319854 LTA4HP09960 611 aaKnown RBP15.46■□□□□ 0.06
SHROOM1-201ENST00000319854 ATP5F1P24539 256 aaPredicted RBP15.46■□□□□ 0.06
SHROOM1-201ENST00000319854 HERC3Q15034 1050 aa15.46■□□□□ 0.06
SHROOM1-201ENST00000319854 NEDD8Q15843 81 aa15.46■□□□□ 0.06
SHROOM1-201ENST00000319854 BCL2A1Q16548 175 aa15.46■□□□□ 0.06
SHROOM1-201ENST00000319854 MOGQ16653 247 aa15.46■□□□□ 0.06
SHROOM1-201ENST00000319854 OR6K2Q8NGY2 324 aa15.46■□□□□ 0.06
SHROOM1-201ENST00000319854 UHRF1Q96T88 793 aaPredicted RBP15.46■□□□□ 0.06
SHROOM1-201ENST00000319854 TRPC7Q9HCX4 862 aa15.46■□□□□ 0.06
SHROOM1-201ENST00000319854 TMED5Q9Y3A6 229 aa15.46■□□□□ 0.06
SHROOM1-201ENST00000319854 S1PR4O95977 384 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 ATXN1LP0C7T5 689 aaKnown RBP15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 BMP1P13497 986 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 MATN1P21941 496 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 NFKBIAP25963 317 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 CST5P28325 142 aaPredicted RBP15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 FMO4P31512 558 aa15.45■□□□□ 0.06
SHROOM1-201ENST00000319854 POLR2IP36954 125 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms