RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 NUDT5Q9UKK9 219 aa13.37□□□□□ -0.27
SKA3-202ENST00000314759 RBMX2Q9Y388 322 aaKnown RBP13.37□□□□□ -0.27
SKA3-202ENST00000314759 ST14Q9Y5Y6 855 aa13.37□□□□□ -0.27
SKA3-202ENST00000314759 E9PAM4 449 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 J3KR12 359 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 OXSR1O95747 527 aaPredicted RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 BCL10O95999 233 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 F2P00734 622 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 GJA8P48165 433 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 ADAM17P78536 824 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 DSC2Q02487 901 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 SLC10A7Q0GE19 358 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 RCAN2Q14206 197 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 PTPRCAPQ14761 206 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 OTUD3Q5T2D3 398 aaPredicted RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 RAB44Q7Z6P3 723 aaPredicted RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 DEFB132Q7Z7B7 95 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 NAT16Q8N8M0 369 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 CASP10Q92851 521 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 BIRC7Q96CA5 298 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 PABPC5Q96DU9 382 aaKnown RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 CNDP2Q96KP4 475 aaKnown RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 GLT1D1Q96MS3 346 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 ATOH8Q96SQ7 321 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 GAD1Q99259 594 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 CHID1Q9BWS9 393 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 MUC13Q9H3R2 512 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 PIF1Q9H611 641 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 TMLHEQ9NVH6 421 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 MIOSQ9NXC5 875 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 TSC22D4Q9Y3Q8 395 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 TIMM22Q9Y584 194 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 SLC30A1Q9Y6M5 507 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 COL4A4P53420 1690 aaPredicted RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 LDB2O43679 373 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 UMPSP11172 480 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 ZNF37AP17032 561 aaPredicted RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 EEF1B2P24534 225 aaKnown RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 HRH2P25021 359 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 RPS3AP61247 264 aaKnown RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 TRIM16LQ309B1 348 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 ZIK1Q3SY52 487 aaPredicted RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 SIRPB2Q5JXA9 342 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 ZNF773Q6PK81 442 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 SLC7A5P1Q8MH63 180 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 ITPKCQ96DU7 683 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 HS3ST4Q9Y661 456 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 DGKBQ9Y6T7 804 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 MIA3Q5JRA6 1907 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 TRIP12Q14669 1992 aaPredicted RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 TNPO2O14787 897 aaKnown RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 ESRRBO95718 433 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 CYBBP04839 570 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 MBL2P11226 248 aaPredicted RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 PCSK1P29120 753 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 HTR7P34969 479 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 OPRL1P41146 370 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 CASP2P42575 452 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 KCNK10P57789 538 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 CLCQ05315 142 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 BFSP2Q13515 415 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 TIGD5Q53EQ6 642 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 PERM1Q5SV97 790 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 PIWIL3Q7Z3Z3 882 aaKnown RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 PNPT1Q8TCS8 783 aaKnown RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 RNF145Q96MT1 663 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 TDRD1Q9BXT4 1180 aaKnown RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 LHPPQ9H008 270 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 PALMDQ9NP74 551 aa13.36□□□□□ -0.27
SKA3-202ENST00000314759 SEMA4BQ9NPR2 832 aaPredicted RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 INTS7Q9NVH2 962 aaKnown RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 GPC6Q9Y625 555 aaPredicted RBP13.36□□□□□ -0.27
SKA3-202ENST00000314759 IQCA1LA6NCM1 817 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 NOL3O60936 208 aaKnown RBP13.35□□□□□ -0.27
SKA3-202ENST00000314759 CLPXO76031 633 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 SEC14L2O76054 403 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 SLC2A3P11169 496 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 EEF1DP29692 281 aaKnown RBP13.35□□□□□ -0.27
SKA3-202ENST00000314759 RENBPP51606 427 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 CRYBB1P53674 252 aaPredicted RBP13.35□□□□□ -0.27
SKA3-202ENST00000314759 TMBIM6P55061 237 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 UFM1P61960 85 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 LCP2Q13094 533 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 SEMA3AQ14563 771 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 POLD3Q15054 466 aaPredicted RBP13.35□□□□□ -0.27
SKA3-202ENST00000314759 TMEM214Q6NUQ4 689 aaKnown RBP13.35□□□□□ -0.27
SKA3-202ENST00000314759 ZNF467Q7Z7K2 595 aaPredicted RBP13.35□□□□□ -0.27
SKA3-202ENST00000314759 ITIH5Q86UX2 942 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 LRRC49Q8IUZ0 686 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 RHEBL1Q8TAI7 183 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 TSPEARQ8WU66 669 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 C1orf50Q9BV19 199 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 NTN4Q9HB63 628 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 DAPK2Q9UIK4 370 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 TMED5Q9Y3A6 229 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 PCDHGA11Q9Y5H2 935 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 CPQQ9Y646 472 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 CASTOR2A6NHX0 329 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 H0YAE9 185 aa13.35□□□□□ -0.27
SKA3-202ENST00000314759 AQP9O43315 295 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms