RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 TMEM221A6NGB7 291 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 MSI1O43347 362 aaKnown RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 SNAP29O95721 258 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 GOT2P00505 430 aaKnown RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 MMP2P08253 660 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 EEF1B2P24534 225 aaKnown RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 CPT1AP50416 773 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 ALDH3A2P51648 485 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 FOXA1P55317 472 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 ERVK-8P63133 956 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 DSC2Q02487 901 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 EMX2Q04743 252 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 UPP1Q16831 310 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 FGD3Q5JSP0 725 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 ANKRD26P1Q6NSI1 321 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 MSANTD2Q6P1R3 559 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 ZNF549Q6P9A3 640 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 LDB1Q86U70 411 aaPredicted RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 HID1Q8IV36 788 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 BPIFB1Q8TDL5 484 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 TADA1Q96BN2 335 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 SLC30A3Q99726 388 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 CHID1Q9BWS9 393 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 C1QTNF3Q9BXJ4 246 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 TDRD1Q9BXT4 1180 aaKnown RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 NOL6Q9H6R4 1146 aaKnown RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 GPN2Q9H9Y4 310 aaPredicted RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 TMEM248Q9NWD8 314 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 TAS2R13Q9NYV9 303 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 GIMAP2Q9UG22 337 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 BTRCQ9Y297 605 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 TLR6Q9Y2C9 796 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 TDRKHQ9Y2W6 561 aaKnown RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 PCDHB3Q9Y5E6 796 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 PTGDR2Q9Y5Y4 395 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 PDHXO00330 501 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 ABCB7O75027 752 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 SEC14L2O76054 403 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 ZBTB11O95625 1053 aaPredicted RBP13.75□□□□□ -0.21
MKS1-201ENST00000313863 EPOP01588 193 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 RPS17P08708 135 aaKnown RBP13.75□□□□□ -0.21
MKS1-201ENST00000313863 IGFBP6P24592 240 aaPredicted RBP13.75□□□□□ -0.21
MKS1-201ENST00000313863 ETFBP38117 255 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 DAG1Q14118 895 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 CBX2Q14781 532 aaPredicted RBP13.75□□□□□ -0.21
MKS1-201ENST00000313863 FAM98BQ52LJ0 330 aaKnown RBP13.75□□□□□ -0.21
MKS1-201ENST00000313863 RABL3Q5HYI8 236 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 ARTNQ5T4W7 220 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 TTC23Q5W5X9 447 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 DCDC5Q6ZRR9 648 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 PLEKHH3Q7Z736 793 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 C14orf80Q86SX3 495 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 TLK2Q86UE8 772 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 NKAPQ8N5F7 415 aaKnown RBP13.75□□□□□ -0.21
MKS1-201ENST00000313863 C3orf58Q8NDZ4 430 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 OR4L1Q8NH43 312 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 SCAMP5Q8TAC9 235 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 CHPT1Q8WUD6 406 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 HMCESQ96FZ2 354 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 TBATAQ96M53 351 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 KCNA7Q96RP8 456 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 PKMYT1Q99640 499 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 ZFYVE28Q9HCC9 887 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 HPS4Q9NQG7 708 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 CACNG4Q9UBN1 327 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 COQ6Q9Y2Z9 468 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 TDRD15B5MCY1 1934 aaKnown RBP13.75□□□□□ -0.21
MKS1-201ENST00000313863 LCHNA4D1U4 455 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 ARL5CA6NH57 179 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 KATNA1O75449 491 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 DNAJB5O75953 348 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 RHOBTB1O94844 696 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 CLIC3O95833 236 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 ATXN1LP0C7T5 689 aaKnown RBP13.75□□□□□ -0.21
MKS1-201ENST00000313863 CHRM3P20309 590 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 STC1P52823 247 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 ARSFP54793 590 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 MAXP61244 160 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 IL10RBQ08334 325 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 SLC10A7Q0GE19 358 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 TRAF2Q12933 501 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 TOP3AQ13472 1001 aaPredicted RBP13.75□□□□□ -0.21
MKS1-201ENST00000313863 TYSND1Q2T9J0 566 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 XKR7Q5GH72 579 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 NANOGP8Q6NSW7 305 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 SPATA2LQ8IUW3 424 aaPredicted RBP13.75□□□□□ -0.21
MKS1-201ENST00000313863 DPP10Q8N608 796 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 BRSK1Q8TDC3 778 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 ACDQ96AP0 544 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 AURKBQ96GD4 344 aaPredicted RBP13.75□□□□□ -0.21
MKS1-201ENST00000313863 RNF145Q96MT1 663 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 NSUN5Q96P11 429 aaKnown RBP13.75□□□□□ -0.21
MKS1-201ENST00000313863 NANOGQ9H9S0 305 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 PRDM5Q9NQX1 630 aaPredicted RBP13.75□□□□□ -0.21
MKS1-201ENST00000313863 COMMD8Q9NX08 183 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 PSME2Q9UL46 239 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 VPS9D1Q9Y2B5 631 aa13.75□□□□□ -0.21
MKS1-201ENST00000313863 OR51F1A6NGY5 319 aa13.74□□□□□ -0.21
MKS1-201ENST00000313863 CASTOR2A6NHX0 329 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms