RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 FAM46CQ5VWP2 391 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 APBA2Q99767 749 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 KAT8Q9H7Z6 458 aaKnown RBP8.78□□□□□ -1
COL6A5-202ENST00000312481 CPNE5Q9HCH3 593 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 GALNT8Q9NY28 637 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 PFDN2Q9UHV9 154 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 RPL36Q9Y3U8 105 aaKnown RBP8.78□□□□□ -1
COL6A5-202ENST00000312481 MAFBQ9Y5Q3 323 aaPredicted RBP8.78□□□□□ -1
COL6A5-202ENST00000312481 TFRCP02786 760 aaKnown RBP8.78□□□□□ -1
COL6A5-202ENST00000312481 KELP23276 732 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 RHBDL3P58872 404 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 CCDC85BQ15834 202 aaPredicted RBP8.78□□□□□ -1
COL6A5-202ENST00000312481 ATP13A5Q4VNC0 1218 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 C16orf46Q6P387 395 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 LRP10Q7Z4F1 713 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 AGAP2Q99490 1192 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 UNC13CQ8NB66 2214 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 TMEM127O75204 238 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 LRCH4O75427 683 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 CLPXO76031 633 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 PGM3O95394 542 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 CST1P01037 141 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 TYMPP19971 482 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 HACD4Q5VWC8 232 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 GPIHBP1Q8IV16 184 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 HID1Q8IV36 788 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 TOR1AIP2Q8NFQ8 470 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 SLC47A1Q96FL8 570 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 TLE6Q9H808 572 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 POMPQ9Y244 141 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 CHKBQ9Y259 395 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 GYS1P13807 737 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 ANKRA2Q9H9E1 313 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 ZBTB26Q9HCK0 441 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 CNTN3Q9P232 1028 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 STOX2Q9P2F5 926 aaPredicted RBP8.78□□□□□ -1
COL6A5-202ENST00000312481 FAM159BA6NKW6 160 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 MYBL2P10244 700 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 PLA2G4EQ3MJ16 856 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 KLHL17Q6TDP4 642 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 ABHD15Q6UXT9 468 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 LRRC70Q7Z2Q7 622 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 PDSS2Q86YH6 399 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 POFUT2Q9Y2G5 429 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 SAMHD1Q9Y3Z3 626 aaKnown RBP8.78□□□□□ -1
COL6A5-202ENST00000312481 PSME4Q14997 1843 aa8.77□□□□□ -1
COL6A5-202ENST00000312481 SHBGP04278 402 aa8.77□□□□□ -1
COL6A5-202ENST00000312481 RPLP0P05388 317 aaKnown RBP8.77□□□□□ -1
COL6A5-202ENST00000312481 RBL1P28749 1068 aa8.77□□□□□ -1
COL6A5-202ENST00000312481 ARL2P36404 184 aa8.77□□□□□ -1
COL6A5-202ENST00000312481 RBBP4Q09028 425 aa8.77□□□□□ -1
COL6A5-202ENST00000312481 LLGL1Q15334 1064 aa8.77□□□□□ -1
COL6A5-202ENST00000312481 HSD17B12Q53GQ0 312 aa8.77□□□□□ -1
COL6A5-202ENST00000312481 MEDAGQ5VYS4 303 aa8.77□□□□□ -1
COL6A5-202ENST00000312481 THOC7Q6I9Y2 204 aaKnown RBP8.77□□□□□ -1
COL6A5-202ENST00000312481 PYHIN1Q6K0P9 492 aa8.77□□□□□ -1
COL6A5-202ENST00000312481 CUZD1Q86UP6 607 aa8.77□□□□□ -1
COL6A5-202ENST00000312481 LHFPL3Q86UP9 236 aa8.77□□□□□ -1
COL6A5-202ENST00000312481 FAM118BQ9BPY3 351 aa8.77□□□□□ -1
COL6A5-202ENST00000312481 C19orf43Q9BQ61 176 aa8.77□□□□□ -1
COL6A5-202ENST00000312481 HDHD2Q9H0R4 259 aa8.77□□□□□ -1
COL6A5-202ENST00000312481 GLS2Q9UI32 602 aa8.77□□□□□ -1
COL6A5-202ENST00000312481 KLRC2P26717 231 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 RABL3Q5HYI8 236 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 OFCC1Q8IZS5 231 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 OXR1Q8N573 874 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 ATG4CQ96DT6 458 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 ACBD6Q9BR61 282 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 SNRNP25Q9BV90 132 aaKnown RBP8.77□□□□□ -1.01
COL6A5-202ENST00000312481 NMUR2Q9GZQ4 415 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 ARL15Q9NXU5 204 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 Q9Y3F1 56 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 MTRF1O75570 445 aaKnown RBP8.77□□□□□ -1.01
COL6A5-202ENST00000312481 SOAT1P35610 550 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 FIG4Q92562 907 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 OR2B2Q9GZK3 357 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 CXorf21Q9HAI6 301 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 MTRRQ9UBK8 725 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 ASB4Q9Y574 426 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 A0A0J9YYE9 177 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 BTN3A1O00481 513 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 MATN3O15232 486 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 CLDN9O95484 217 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 HOXD8P13378 290 aaPredicted RBP8.77□□□□□ -1.01
COL6A5-202ENST00000312481 TCN1P20061 433 aaPredicted RBP8.77□□□□□ -1.01
COL6A5-202ENST00000312481 CLDN10P78369 228 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 USP50Q70EL3 339 aaPredicted RBP8.77□□□□□ -1.01
COL6A5-202ENST00000312481 ZNF540Q8NDQ6 660 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 SELENOMQ8WWX9 145 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 RTP4Q96DX8 246 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 SLC22A4Q9H015 551 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 PCDHGB2Q9Y5G2 931 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 PCDHGA11Q9Y5H2 935 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 PCDHGA10Q9Y5H3 936 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 WNT7AO00755 349 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 NSG1P42857 185 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 MAGEA6P43360 314 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 CPA2P48052 419 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 PFKFB4Q16877 469 aa8.77□□□□□ -1.01
COL6A5-202ENST00000312481 CPTPQ5TA50 214 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms