RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 CCKBRP32239 447 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 UGT2B15P54855 530 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GJA9P57773 515 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CAP1Q01518 475 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GALNT3Q14435 633 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SYT16Q17RD7 645 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 KLHL12Q53G59 568 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TRIQKQ629K1 86 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ASB18Q6ZVZ8 466 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SLC29A4Q7RTT9 530 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GPR141Q7Z602 305 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GPALPP1Q8IXQ4 340 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 NELL1Q92832 810 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 MOAP1Q96BY2 351 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SIPA1Q96FS4 1042 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 B3GALT6Q96L58 329 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SCGB3A2Q96PL1 93 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GBA3Q9H227 469 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GDAP2Q9NXN4 497 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 B4GALT7Q9UBV7 327 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SEC14L4Q9UDX3 406 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 MAGEL2Q9UJ55 1249 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PYCARDQ9ULZ3 195 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 MTF2Q9Y483 593 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 DOCK2Q92608 1830 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 A0A1W2PQ72 361 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PSMD11O00231 422 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 HDAC3O15379 428 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CILPO75339 1184 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 NOL4O94818 638 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 HLA-DQA2P01906 255 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ICAM2P13598 275 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CASP1P29466 404 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ADRA1BP35368 520 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 HNF4AP41235 474 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 RPL14P50914 215 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 DGKEP52429 567 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SLC5A3P53794 718 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 FMR1Q06787 632 aaKnown RBP eCLIP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SP140Q13342 867 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 DCTN2Q13561 401 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ANGPT1Q15389 498 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GRIK5Q16478 980 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 DRICH1Q6PGQ1 229 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 LRRC74BQ6ZQY2 392 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CHST9Q7L1S5 443 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TREML1Q86YW5 311 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PLXDC1Q8IUK5 500 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 MMAAQ8IVH4 418 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 UNC5BQ8IZJ1 945 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PJA1Q8NG27 643 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 BPIFB1Q8TDL5 484 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 LCN9Q8WX39 176 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 DNAJC9Q8WXX5 260 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 COL26A1Q96A83 441 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 KAZALD1Q96I82 304 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 EPYCQ99645 322 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TDRD1Q9BXT4 1180 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ARHGEF3Q9NR81 526 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 KCND1Q9NSA2 647 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 NKIRAS2Q9NYR9 191 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GDE1Q9NZC3 331 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 WBP11Q9Y2W2 641 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PHIPQ8WWQ0 1821 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TEX13CA0A0J9YWL9 993 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TMEM191CA6NGB0 347 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 EIF3FO00303 357 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SLC7A4O43246 635 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TSPAN3O60637 253 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PAGE1O75459 146 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CYP7B1O75881 506 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 F2P00734 622 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 UGT1A1P22309 533 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ITPKBP27987 946 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PPARDQ03181 441 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SQLEQ14534 574 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TAF1AQ15573 450 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SLC25A24Q6NUK1 477 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TMPRSS11AQ6ZMR5 421 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 APTXQ7Z2E3 356 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 DHFR2Q86XF0 187 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 EPHX4Q8IUS5 362 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CYP4X1Q8N118 509 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 C4orf33Q8N1A6 199 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 LIX1Q8N485 282 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CCDC33Q8N5R6 958 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 OR10H5Q8NGA6 315 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 OR4C6Q8NH72 309 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TMEM234Q8WY98 164 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 VPS35Q96QK1 796 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF347Q96SE7 839 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TRIM51Q9BSJ1 452 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 HERC2P3Q9BVR0 1158 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 KCNH6Q9H252 994 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 AGO3Q9H9G7 860 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 L2HGDHQ9H9P8 463 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GDF3Q9NR23 364 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 IMP3Q9NV31 184 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ZDHHC7Q9NXF8 308 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CCDC167Q9P0B6 97 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms