RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 ERLEC1Q96DZ1 483 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 CATSPER2Q96P56 530 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 QKIQ96PU8 341 aaKnown RBP eCLIP8.24□□□□□ -1.091e-6■■■■□ 21.8
CHD6-201ENST00000309279 NAPGQ99747 312 aaPredicted RBP8.24□□□□□ -1.09
CHD6-201ENST00000309279 CINPQ9BW66 212 aaPredicted RBP8.24□□□□□ -1.09
CHD6-201ENST00000309279 FRMD8P1Q9BZ68 369 aaPredicted RBP8.24□□□□□ -1.09
CHD6-201ENST00000309279 SLC6A17Q9H1V8 727 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 RBM22Q9NW64 420 aaKnown RBP eCLIP8.24□□□□□ -1.092e-6■■□□□ 13.7
CHD6-201ENST00000309279 ZSCAN32Q9NX65 697 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 USP36Q9P275 1121 aaKnown RBP8.24□□□□□ -1.09
CHD6-201ENST00000309279 MALT1Q9UDY8 824 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 IL36AQ9UHA7 158 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 R3HDM2Q9Y2K5 976 aaKnown RBP8.24□□□□□ -1.09
CHD6-201ENST00000309279 PCDHGB6Q9Y5F9 930 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 PCDHGA2Q9Y5H1 932 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 BCLAF3A2AJT9 711 aaKnown RBP8.23□□□□□ -1.09
CHD6-201ENST00000309279 RNF103O00237 685 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 NEMP1O14524 444 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 BNIP3LO60238 219 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 LILRB5O75023 590 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 LEFTY1O75610 366 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 ZNF189O75820 626 aaPredicted RBP8.23□□□□□ -1.09
CHD6-201ENST00000309279 ADH1BP00325 375 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 IL1BP01584 269 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 JCHAINP01591 159 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 HEXBP07686 556 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 CKMT1AP12532 417 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 IL11P20809 199 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 C5AR1P21730 350 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 PTPN3P26045 913 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 SLC8A1P32418 973 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 CNR2P34972 360 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 DRD3P35462 400 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 PXNP49023 591 aaPredicted RBP8.23□□□□□ -1.09
CHD6-201ENST00000309279 FNTBP49356 437 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 HNMTP50135 292 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 TPMTP51580 245 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 EIF3EP60228 445 aaKnown RBP8.23□□□□□ -1.09
CHD6-201ENST00000309279 RAD51Q06609 339 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 ZNF235Q14590 738 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 SMAD1Q15797 465 aaKnown RBP8.23□□□□□ -1.09
CHD6-201ENST00000309279 ZNF674Q2M3X9 581 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 ARSIQ5FYB1 569 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 ATXN7L2Q5T6C5 722 aaPredicted RBP8.23□□□□□ -1.09
CHD6-201ENST00000309279 FAM46CQ5VWP2 391 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 FOXB2Q5VYV0 432 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 DRICH1Q6PGQ1 229 aaPredicted RBP8.23□□□□□ -1.09
CHD6-201ENST00000309279 IL27RAQ6UWB1 636 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 PPP1R21Q6ZMI0 780 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 USP30Q70CQ3 517 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 PRSS33Q8NF86 280 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 PIP4K2CQ8TBX8 421 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 ACTRT1Q8TDG2 376 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 HCAR2Q8TDS4 363 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 MAIP1Q8WWC4 291 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 HTR3CQ8WXA8 447 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 SCG3Q8WXD2 468 aaKnown RBP8.23□□□□□ -1.09
CHD6-201ENST00000309279 NKD2Q969F2 451 aaPredicted RBP8.23□□□□□ -1.09
CHD6-201ENST00000309279 EXOC2Q96KP1 924 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 TEKT5Q96M29 485 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 NSMCE3Q96MG7 304 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 ZNF641Q96N77 438 aaPredicted RBP8.23□□□□□ -1.09
CHD6-201ENST00000309279 NUDCD1Q96RS6 583 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 TUBGCP5Q96RT8 1024 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 VAT1Q99536 393 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 SPATA9Q9BWV2 254 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 OSBPL1AQ9BXW6 950 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 POLR1EQ9GZS1 481 aaKnown RBP8.23□□□□□ -1.09
CHD6-201ENST00000309279 PABPC3Q9H361 631 aaKnown RBP8.23□□□□□ -1.09
CHD6-201ENST00000309279 USP29Q9HBJ7 922 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 TM9SF3Q9HD45 589 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 HAUS2Q9NVX0 235 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 RSPH14Q9UHP6 348 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 PCDHGA11Q9Y5H2 935 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 SAR1BQ9Y6B6 198 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 CEP192Q8TEP8 1941 aa8.23□□□□□ -1.09
CHD6-201ENST00000309279 GON4LQ3T8J9 2241 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 RGSL1A5PLK6 1076 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 KRT87PA6NCN2 255 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 C1QTNF3-AMACRE9PGA6 284 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 H7C0C1 242 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 KRIT1O00522 736 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 GIPC1O14908 333 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 MID1O15344 667 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 INSIG1O15503 277 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 LIASO43766 372 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 RNGTTO60942 597 aaKnown RBP8.22□□□□□ -1.09
CHD6-201ENST00000309279 PRKD3O94806 890 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 TUBB4AP04350 444 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 HLA-DQB2P05538 268 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 ACADMP11310 421 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 KELP23276 732 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 ITGB7P26010 798 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 RBL1P28749 1068 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 GKP32189 559 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 P2RY2P41231 377 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 HAAOP46952 286 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 SCNN1BP51168 640 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 METAP1P53582 386 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 AP1S1P61966 158 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms