RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 FAM47DPA6NHR8 397 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 STX7O15400 261 aaKnown RBP10.69□□□□□ -0.7
CASP3-201ENST00000308394 SLC7A4O43246 635 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 RPP40O75818 363 aaKnown RBP10.69□□□□□ -0.7
CASP3-201ENST00000308394 GOT2P00505 430 aaKnown RBP10.69□□□□□ -0.7
CASP3-201ENST00000308394 TRBC1P01850 177 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 AHSGP02765 367 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 HLA-EP13747 358 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 SAT1P21673 171 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 PBLDP30039 288 aaPredicted RBP10.69□□□□□ -0.7
CASP3-201ENST00000308394 DSTNP60981 165 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 RPL26P61254 145 aaKnown RBP10.69□□□□□ -0.7
CASP3-201ENST00000308394 SEMG2Q02383 582 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 MPP2Q14168 576 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 EIF4HQ15056 248 aaKnown RBP10.69□□□□□ -0.7
CASP3-201ENST00000308394 ARSIQ5FYB1 569 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 FSTL4Q6MZW2 842 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 GDPD4Q6W3E5 623 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 LYSMD3Q7Z3D4 306 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 ZSWIM9Q86XI8 627 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 PNPLA1Q8N8W4 532 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 UCMAQ8WVF2 138 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 DYDC1Q8WWB3 177 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 PEX13Q92968 403 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 CHFRQ96EP1 664 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 CDKN2AIPNLQ96HQ2 116 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 ZNF641Q96N77 438 aaPredicted RBP10.69□□□□□ -0.7
CASP3-201ENST00000308394 KLHL32Q96NJ5 620 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 MAGEE1Q9HCI5 957 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 ZDHHC4Q9NPG8 344 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 NLE1Q9NVX2 485 aaPredicted RBP10.69□□□□□ -0.7
CASP3-201ENST00000308394 RPL26L1Q9UNX3 145 aaKnown RBP10.69□□□□□ -0.7
CASP3-201ENST00000308394 PKP3Q9Y446 797 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 BPTFQ12830 3046 aa10.69□□□□□ -0.7
CASP3-201ENST00000308394 ANKRD36A6QL64 1941 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 TRAV6A0A075B6T7 132 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 C1orf232A0A0U1RR37 186 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 CCDC162PA2VCL2 907 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.68□□□□□ -0.7
CASP3-201ENST00000308394 CHUKO15111 745 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 LEFTY1O75610 366 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 RFPL1O75677 317 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 KAT7O95251 611 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 TROVE2P10155 538 aaKnown RBP eCLIP10.68□□□□□ -0.7
CASP3-201ENST00000308394 RPA3P35244 121 aaPredicted RBP10.68□□□□□ -0.7
CASP3-201ENST00000308394 HNF1BP35680 557 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 LIMK2P53671 638 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 HTR4Q13639 388 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 UGP2Q16851 508 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 AAK1Q2M2I8 961 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 NUDT18Q6ZVK8 323 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 LDB1Q86U70 411 aaPredicted RBP10.68□□□□□ -0.7
CASP3-201ENST00000308394 CNTN4Q8IWV2 1026 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 GDAP1Q8TB36 358 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 MFSD1Q9H3U5 465 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 ZFYVE1Q9HBF4 777 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 FBXO6Q9NRD1 293 aaPredicted RBP10.68□□□□□ -0.7
CASP3-201ENST00000308394 PCMTD2Q9NV79 361 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 POLR3BQ9NW08 1133 aaPredicted RBP10.68□□□□□ -0.7
CASP3-201ENST00000308394 IL36AQ9UHA7 158 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 FBXO5Q9UKT4 447 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 PHTF1Q9UMS5 762 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 SMG5Q9UPR3 1016 aaKnown RBP10.68□□□□□ -0.7
CASP3-201ENST00000308394 MTO1Q9Y2Z2 717 aaKnown RBP10.68□□□□□ -0.7
CASP3-201ENST00000308394 TPP1O14773 563 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 HAUS5O94927 633 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 RASGRP1O95267 797 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 IDO1P14902 403 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 NFKBIAP25963 317 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 TYK2P29597 1187 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 ZNF140P52738 457 aaPredicted RBP10.68□□□□□ -0.7
CASP3-201ENST00000308394 ACVR1Q04771 509 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 LRRC74AQ0VAA2 488 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 ZNF234Q14588 700 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 POM121L1PQ3SYA9 428 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 LRRC73Q5JTD7 316 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 WLSQ5T9L3 541 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 SERPINA13PQ6UXR4 307 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 PHTF2Q8N3S3 785 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 GOLM1Q8NBJ4 401 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 C2CD4AQ8NCU7 369 aaPredicted RBP10.68□□□□□ -0.7
CASP3-201ENST00000308394 OR4L1Q8NH43 312 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 VOPP1Q96AW1 172 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 ALKBH8Q96BT7 664 aaKnown RBP10.68□□□□□ -0.7
CASP3-201ENST00000308394 ERLEC1Q96DZ1 483 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 VPS39Q96JC1 886 aa10.68□□□□□ -0.7
CASP3-201ENST00000308394 SRPK1Q96SB4 655 aaKnown RBP10.68□□□□□ -0.7
CASP3-201ENST00000308394 C2CD4DB7Z1M9 353 aa10.67□□□□□ -0.7
CASP3-201ENST00000308394 WASH3PC4AMC7 463 aa10.67□□□□□ -0.7
CASP3-201ENST00000308394 ANHXE9PGG2 379 aa10.67□□□□□ -0.7
CASP3-201ENST00000308394 ARNTLO00327 626 aa10.67□□□□□ -0.7
CASP3-201ENST00000308394 COPEO14579 308 aa10.67□□□□□ -0.7
CASP3-201ENST00000308394 CD3EAPO15446 510 aaKnown RBP10.67□□□□□ -0.7
CASP3-201ENST00000308394 PRPF4O43172 522 aaKnown RBP eCLIP10.67□□□□□ -0.73e-6■■■□□ 18.9
CASP3-201ENST00000308394 TYROBPO43914 113 aa10.67□□□□□ -0.7
CASP3-201ENST00000308394 CLDN7O95471 211 aa10.67□□□□□ -0.7
CASP3-201ENST00000308394 ALDOAP04075 364 aaKnown RBP10.67□□□□□ -0.7
CASP3-201ENST00000308394 APODP05090 189 aa10.67□□□□□ -0.7
CASP3-201ENST00000308394 ALAS2P22557 587 aa10.67□□□□□ -0.7
CASP3-201ENST00000308394 GABRB3P28472 473 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms