RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ALPIP09923 528 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 ZNF786Q8N393 782 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 ITFG1Q8TB96 612 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 ANKRD36CQ5JPF3 1778 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 HNRNPLP14866 589 aaKnown RBP eCLIP10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 SERPINB3P29508 390 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 HOXC12P31275 282 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 IFI35P80217 286 aaPredicted RBP10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 ENPEPQ07075 957 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 KCTD19Q17RG1 926 aaPredicted RBP10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 OSTM1Q86WC4 334 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 PHC3Q8NDX5 983 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 KLHDC7BQ96G42 594 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 RNF145Q96MT1 663 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 ADAM7Q9H2U9 754 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 COQ6Q9Y2Z9 468 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 A0A0U1RQJ8 604 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 NSG1P42857 185 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 UNC5BQ8IZJ1 945 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 SIDT2Q8NBJ9 832 aaKnown RBP10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 RBM18Q96H35 190 aaKnown RBP10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 RIOK2Q9BVS4 552 aaKnown RBP10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 PCBD2Q9H0N5 130 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 KCNN2Q9H2S1 579 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 ERVK-5Q9HDB9 667 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 GDF3Q9NR23 364 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 LZTS1Q9Y250 596 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 NHSQ6T4R5 1651 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 RNF225M0QZC1 329 aaPredicted RBP10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 B3GALT2O43825 422 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 SNAP91O60641 907 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 PIGRP01833 764 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 RB1P06400 928 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 FCGR1AP12314 374 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 TAS2R50P59544 299 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 ITIH4Q14624 930 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 ANXA8L1Q5VT79 327 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 BRAT1Q6PJG6 821 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 FNIP1Q8TF40 1166 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 PWWP2AQ96N64 755 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 PANX1Q96RD7 426 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 LMAN2LQ9H0V9 348 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 GDAP2Q9NXN4 497 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 POLR3HQ9Y535 204 aaPredicted RBP10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 MPP1Q00013 466 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 PLGLB1Q02325 96 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 OC90Q02509 493 aaPredicted RBP10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 CREB5Q02930 508 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 MYLK3Q32MK0 819 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 COLEC12Q5KU26 742 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 FBXL22Q6P050 247 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 DAW1Q8N136 415 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 MBOAT7Q96N66 472 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 SIKE1Q9BRV8 207 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 NDC1Q9BTX1 674 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 PAPOLBQ9NRJ5 636 aaKnown RBP10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 TCAF1Q9Y4C2 921 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 ILVBLA1L0T0 632 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 VIPR1P32241 457 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 CDKN2BP42772 138 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 MAGEA9P43362 315 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 TAS2R41P59536 307 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 IL5RAQ01344 420 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 C1DQ13901 141 aaKnown RBP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 MED27Q6P2C8 311 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 LPCAT2Q7L5N7 544 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 XPR1Q9UBH6 696 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 CNMDO75829 334 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 JAM2P57087 298 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 ZC3H14Q6PJT7 736 aaKnown RBP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 DHFR2Q86XF0 187 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 SRFBP1Q8NEF9 429 aaKnown RBP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 PCYT2Q99447 389 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 GPR174Q9BXC1 333 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 GPR62Q9BZJ7 368 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 PCDHGB3Q9Y5G1 929 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 CFAP20Q9Y6A4 193 aaKnown RBP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 SMNDC1O75940 238 aaKnown RBP eCLIP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 KLK3P07288 261 aaPredicted RBP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 MAPK10P53779 464 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 CSNK2BP67870 215 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 C2orf80Q0P641 193 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 LPAL2Q16609 132 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 OTUD3Q5T2D3 398 aaPredicted RBP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 FAM171BQ6P995 826 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 HNRNPLLQ8WVV9 542 aaKnown RBP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 SLC9A6Q92581 669 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 ROGDIQ9GZN7 287 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 EXD2Q9NVH0 621 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 PRR23D1E9PI22 279 aaPredicted RBP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 COCHO43405 550 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 PRR23D2P0DMB1 279 aaPredicted RBP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 GPD2P43304 727 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 SEPHS1P49903 392 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 CAMK1DQ8IU85 385 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 PCDH20Q8N6Y1 951 aaKnown RBP10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 PRELID2Q8N945 189 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 ITCHQ96J02 903 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 TMEM209Q96SK2 561 aa10.62□□□□□ -0.71
SYNPO2-201ENST00000307142 HS3ST4Q9Y661 456 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms