RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SLCO1B7G3V0H7 640 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 DENRO43583 198 aaKnown RBP14.5□□□□□ -0.09
PTPN9-201ENST00000306726 CLASP2O75122 1294 aaKnown RBP14.5□□□□□ -0.09
PTPN9-201ENST00000306726 OR4F21O95013 312 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 DLGAP3O95886 979 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 TAF12Q16514 161 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 C16orf59Q7L2K0 433 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 ST13P5Q8NFI4 369 aaPredicted RBP14.5□□□□□ -0.09
PTPN9-201ENST00000306726 NPY6RQ99463 290 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 C6orf62Q9GZU0 229 aaPredicted RBP14.5□□□□□ -0.09
PTPN9-201ENST00000306726 SMPD4Q9NXE4 827 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 ADAM28Q9UKQ2 775 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.5□□□□□ -0.09
PTPN9-201ENST00000306726 SQORQ9Y6N5 450 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 ANKRD33BA6NCL7 494 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 PBX3P40426 434 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 GLUD2P49448 558 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 PCYT1AP49585 367 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 ADAM17P78536 824 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 XIAPP98170 497 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 CHRNB3Q05901 458 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 TSTD2Q5T7W7 516 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 KIAA0319Q5VV43 1072 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 GLYATQ6IB77 296 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 PAQR3Q6TCH7 311 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 ABRAXAS1Q6UWZ7 409 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 CXCL17Q6UXB2 119 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 ADGRG6Q86SQ4 1221 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 SLC43A3Q8NBI5 491 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 ITFG1Q8TB96 612 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 ULK4Q96C45 1275 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 CASS4Q9NQ75 786 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 SH3GLB1Q9Y371 365 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 ARVCFO00192 962 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 CBX4O00257 560 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 THP07101 528 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 RBP1P09455 135 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 HAPLN1P10915 354 aaPredicted RBP14.5□□□□□ -0.09
PTPN9-201ENST00000306726 SLC2A3P11169 496 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 CCNA2P20248 432 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 RPS9P46781 194 aaKnown RBP14.5□□□□□ -0.09
PTPN9-201ENST00000306726 GSK3BP49841 420 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 CDKN1CP49918 316 aaPredicted RBP14.5□□□□□ -0.09
PTPN9-201ENST00000306726 UBE3AQ05086 875 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 FAM187BQ17R55 369 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 SLC39A12Q504Y0 691 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 ARMC12Q5T9G4 340 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 STEAP4Q687X5 459 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 LINGO4Q6UY18 593 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 ZDHHC17Q8IUH5 632 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 SLC15A3Q8IY34 581 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 PHACTR4Q8IZ21 702 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 SLC7A5P1Q8MH63 180 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 LPCAT1Q8NF37 534 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 ZDHHC7Q9NXF8 308 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 EIF2B4Q9UI10 523 aaKnown RBP14.5□□□□□ -0.09
PTPN9-201ENST00000306726 FBXW11Q9UKB1 542 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 BAG5Q9UL15 447 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 SH3BP1Q9Y3L3 701 aa14.5□□□□□ -0.09
PTPN9-201ENST00000306726 UBFD1O14562 309 aaKnown RBP14.49□□□□□ -0.09
PTPN9-201ENST00000306726 DAB1O75553 588 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 ALDOCP09972 364 aaKnown RBP14.49□□□□□ -0.09
PTPN9-201ENST00000306726 AXLP30530 894 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 OR1E1P30953 314 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 FMO3P31513 532 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 OR1G1P47890 313 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 CLCN2P51788 898 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 TGFBIQ15582 683 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 C1orf53Q5VUE5 145 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 KIAA2013Q8IYS2 634 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 TTC39CQ8N584 583 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 SLC15A4Q8N697 577 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 ATAD1Q8NBU5 361 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 PLEKHA8Q96JA3 519 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 DEFB118Q96PH6 123 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 AGO3Q9H9G7 860 aaKnown RBP14.49□□□□□ -0.09
PTPN9-201ENST00000306726 DDX28Q9NUL7 540 aaKnown RBP14.49□□□□□ -0.09
PTPN9-201ENST00000306726 TCAF1Q9Y4C2 921 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 PCDHGC4Q9Y5F7 938 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 MAGEB16A2A368 324 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 MYADML2A6NDP7 307 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 DPYSL4O14531 572 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 DCLK1O15075 740 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 LBPP18428 481 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 SLC7A1P30825 629 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 TMEM236Q5W0B7 351 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 SLC22A15Q8IZD6 547 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 CENPSQ8N2Z9 138 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 OR10A6Q8NH74 314 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 GIPC2Q8TF65 315 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 CASP10Q92851 521 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 ITFG2Q969R8 447 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 HMCESQ96FZ2 354 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 TEX37Q96LM6 180 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 BBS2Q9BXC9 721 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.49□□□□□ -0.09
PTPN9-201ENST00000306726 SLC8A2Q9UPR5 921 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 DNAJC15Q9Y5T4 150 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 A0A1W2PQ45 241 aaPredicted RBP14.49□□□□□ -0.09
PTPN9-201ENST00000306726 A0A1W2PQY0 241 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms