RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 MDGA1Q8NFP4 955 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 LINC01599Q8WXQ3 324 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 FATE1Q969F0 183 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 FUBP3Q96I24 572 aaKnown RBP eCLIP15.03■□□□□ -0
CSDC2-201ENST00000306149 BIRC8Q96P09 236 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 FAM193BQ96PV7 902 aaPredicted RBP15.03■□□□□ -0
CSDC2-201ENST00000306149 HBEGFQ99075 208 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 TFB2MQ9H5Q4 396 aaKnown RBP15.03■□□□□ -0
CSDC2-201ENST00000306149 CLK4Q9HAZ1 481 aaKnown RBP15.03■□□□□ -0
CSDC2-201ENST00000306149 CCM2LQ9NUG4 571 aaPredicted RBP15.03■□□□□ -0
CSDC2-201ENST00000306149 GALNT8Q9NY28 637 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 NT5C1B-RDH14C9J2C7 533 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 BTN3A1O00481 513 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 TLR5O60602 858 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 SUOXP51687 545 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 PTPRNQ16849 979 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 KCTD21Q4G0X4 260 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 INTS11Q5TA45 600 aaKnown RBP15.03■□□□□ -0
CSDC2-201ENST00000306149 MFSD14CQ5VZR4 134 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 LPCAT2Q7L5N7 544 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 EPHX4Q8IUS5 362 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 PIANPQ8IYJ0 282 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 GPR150Q8NGU9 434 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 RHEBL1Q8TAI7 183 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 STAG3L4Q8TBR4 150 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 TFAP2CQ92754 450 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 GFM2Q969S9 779 aaKnown RBP15.03■□□□□ -0
CSDC2-201ENST00000306149 TMEM74Q96NL1 305 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 CDK15Q96Q40 435 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 TRIM15Q9C019 465 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 TLR8Q9NR97 1041 aaKnown RBP15.03■□□□□ -0
CSDC2-201ENST00000306149 SDR39U1Q9NRG7 319 aaPredicted RBP15.03■□□□□ -0
CSDC2-201ENST00000306149 ZNF225Q9UK10 706 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 PCDHGC4Q9Y5F7 938 aa15.03■□□□□ -0
CSDC2-201ENST00000306149 TRIM64CA6NLI5 447 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 AQP12BA6NM10 295 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 TSPAN3O60637 253 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 NIPSNAP2O75323 286 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 NDUFS3O75489 264 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 PYGLP06737 847 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 GATMP50440 423 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 ATP6V0D1P61421 351 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 UFM1P61960 85 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 LCP2Q13094 533 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 DUSP4Q13115 394 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 MBTPS1Q14703 1052 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 PLA2G4EQ3MJ16 856 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 PAGE3Q5JUK9 113 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 GLT6D1Q7Z4J2 308 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 SYVN1Q86TM6 617 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 AQP12AQ8IXF9 295 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 GOLM1Q8NBJ4 401 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 SIDT2Q8NBJ9 832 aaKnown RBP15.02■□□□□ -0
CSDC2-201ENST00000306149 KIAA1191Q96A73 305 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 CCDC68Q9H2F9 335 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 PDFQ9HBH1 243 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 SARS2Q9NP81 518 aaKnown RBP15.02■□□□□ -0
CSDC2-201ENST00000306149 SMOXQ9NWM0 555 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 TUBA8Q9NY65 449 aaPredicted RBP15.02■□□□□ -0
CSDC2-201ENST00000306149 TAS2R13Q9NYV9 303 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 VWA8A3KMH1 1905 aa15.02■□□□□ -0
CSDC2-201ENST00000306149 DLGAP1O14490 977 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 ARPC2O15144 300 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 INPP4BO15327 924 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 SEPT4O43236 478 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 KERAO60938 352 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 NDST3O95803 873 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 HOXD9P28356 352 aaPredicted RBP15.02□□□□□ -0.01
CSDC2-201ENST00000306149 EMP3P54852 163 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 NFYCQ13952 458 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 ANKS6Q68DC2 871 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 PSAPL1Q6NUJ1 521 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 BLOC1S3Q6QNY0 202 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 RNF19BQ6ZMZ0 732 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 CMTR2Q8IYT2 770 aaKnown RBP15.02□□□□□ -0.01
CSDC2-201ENST00000306149 UPF1Q92900 1129 aaKnown RBP eCLIP15.02□□□□□ -0.01
CSDC2-201ENST00000306149 FUBP1Q96AE4 644 aaKnown RBP15.02□□□□□ -0.01
CSDC2-201ENST00000306149 TRIB3Q96RU7 358 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 HOPXQ9BPY8 73 aaPredicted RBP15.02□□□□□ -0.01
CSDC2-201ENST00000306149 GPR45Q9Y5Y3 372 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 RNF103-CHMP3A0A140T963 221 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 ASPDHA6ND91 283 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 IQCF5A8MTL0 148 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 ARL1P40616 181 aaPredicted RBP15.02□□□□□ -0.01
CSDC2-201ENST00000306149 MYBPC3Q14896 1274 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 TRIM71Q2Q1W2 868 aaKnown RBP15.02□□□□□ -0.01
CSDC2-201ENST00000306149 DHRS4L2Q6PKH6 230 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 MINDY1Q8N5J2 469 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 EFHBQ8N7U6 833 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 ASB2Q96Q27 587 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 SLC52A3Q9NQ40 469 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 OAZ3Q9UMX2 235 aa15.02□□□□□ -0.01
CSDC2-201ENST00000306149 ZFP37Q9Y6Q3 630 aaPredicted RBP15.02□□□□□ -0.01
CSDC2-201ENST00000306149 PLXNA3P51805 1871 aa15.01□□□□□ -0.01
CSDC2-201ENST00000306149 A0A0J9YVX5 310 aa15.01□□□□□ -0.01
CSDC2-201ENST00000306149 MANSC4A6NHS7 340 aaPredicted RBP15.01□□□□□ -0.01
CSDC2-201ENST00000306149 F5H5T6 163 aa15.01□□□□□ -0.01
CSDC2-201ENST00000306149 SCAMP3O14828 347 aaKnown RBP15.01□□□□□ -0.01
CSDC2-201ENST00000306149 HSD17B1P14061 328 aa15.01□□□□□ -0.01
CSDC2-201ENST00000306149 ELNP15502 786 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms