RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 CYP51A1Q16850 503 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 LRRC66Q68CR7 880 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 SLC36A4Q6YBV0 504 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 ARCQ7LC44 396 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 GPR149Q86SP6 731 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 CPNE8Q86YQ8 564 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 TCAIMQ8N3R3 496 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 MPP5Q8N3R9 675 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 TRPC4APQ8TEL6 797 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 STARD8Q92502 1023 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 PHF7Q9BWX1 381 aaPredicted RBP9.21□□□□□ -0.94
PTPRE-202ENST00000306042 NDEL1Q9GZM8 345 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 ACTR5Q9H9F9 607 aaPredicted RBP9.21□□□□□ -0.94
PTPRE-202ENST00000306042 UGT1A7Q9HAW7 530 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 UGT1A10Q9HAW8 530 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 UGT1A8Q9HAW9 530 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 TMBIM4Q9HC24 238 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 GON4LQ3T8J9 2241 aa9.21□□□□□ -0.94
PTPRE-202ENST00000306042 FFAR3O14843 346 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 GPR42O15529 346 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 SOCS5O75159 536 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 OTCP00480 354 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 TFE3P19532 575 aaPredicted RBP9.2□□□□□ -0.94
PTPRE-202ENST00000306042 GKP32189 559 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 SLC1A6P48664 564 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 NAGLUP54802 743 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 CPSF6Q16630 551 aaKnown RBP eCLIP9.2□□□□□ -0.94
PTPRE-202ENST00000306042 DUSP6Q16828 381 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 C1orf53Q5VUE5 145 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 HIBCHQ6NVY1 386 aaPredicted RBP9.2□□□□□ -0.94
PTPRE-202ENST00000306042 DRICH1Q6PGQ1 229 aaPredicted RBP9.2□□□□□ -0.94
PTPRE-202ENST00000306042 C16orf89Q6UX73 402 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 BEND5Q7L4P6 421 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 UMODL1-AS1Q8N2C9 162 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 SPATA6LQ8N4H0 392 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 WDTC1Q8N5D0 677 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 AURKCQ9UQB9 309 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 LAMB1P07942 1786 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 CEP290O15078 2479 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 ECM29Q5VYK3 1845 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 RNF103-CHMP3A0A140T963 221 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 ZSCAN9O15535 394 aaPredicted RBP9.2□□□□□ -0.94
PTPRE-202ENST00000306042 FFAR2O15552 330 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 ABHD2P08910 425 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 COX7A2P14406 83 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 ATF6P18850 670 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 C5AR1P21730 350 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 NAE1Q13564 534 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 INPP5AQ14642 412 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 SLC1A5Q15758 541 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 SLC44A4Q53GD3 710 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 XKR4Q5GH76 650 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 CHSY3Q70JA7 882 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 SCD5Q86SK9 330 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 C10orf53Q8N6V4 93 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 TTC29Q8NA56 475 aaPredicted RBP9.2□□□□□ -0.94
PTPRE-202ENST00000306042 OR2T3Q8NH03 318 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 ACMSDQ8TDX5 336 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 ANKZF1Q9H8Y5 726 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 SNX15Q9NRS6 342 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 IL1RAPL1Q9NZN1 696 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 CYTH4Q9UIA0 394 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 CNTN6Q9UQ52 1028 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 RNGTTO60942 597 aaKnown RBP9.2□□□□□ -0.94
PTPRE-202ENST00000306042 PIAS1O75925 651 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 OGNP20774 298 aaKnown RBP9.2□□□□□ -0.94
PTPRE-202ENST00000306042 ITPKAP23677 461 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 SLC7A9P82251 487 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 CSTF1Q05048 431 aaKnown RBP9.2□□□□□ -0.94
PTPRE-202ENST00000306042 ELOAQ14241 798 aaKnown RBP9.2□□□□□ -0.94
PTPRE-202ENST00000306042 PHF19Q5T6S3 580 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 MFSD6LQ8IWD5 586 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 OR13C4Q8NGS5 318 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 FAM83CQ9BQN1 747 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 CEP44Q9C0F1 390 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 ZNF334Q9HCZ1 680 aaPredicted RBP9.2□□□□□ -0.94
PTPRE-202ENST00000306042 FANCFQ9NPI8 374 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 CCDC177Q9NQR7 707 aaPredicted RBP9.2□□□□□ -0.94
PTPRE-202ENST00000306042 KCND1Q9NSA2 647 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 RPS6KB2Q9UBS0 482 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 VTI1BQ9UEU0 232 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 CDK5RAP2Q96SN8 1893 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 A0A1W2PQU0 124 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 AXIN1O15169 862 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 VPS4BO75351 444 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 NMBRP28336 390 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 HOXA9P31269 272 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 CD70P32970 193 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 AQP5P55064 265 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 TNK2Q07912 1038 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 TRIM71Q2Q1W2 868 aaKnown RBP9.2□□□□□ -0.94
PTPRE-202ENST00000306042 GRAMD1BQ3KR37 738 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 SIRPB2Q5JXA9 342 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 GPR65Q8IYL9 337 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 METTL21AQ8WXB1 218 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 MAGEB18Q96M61 343 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 RAB11FIP5Q9BXF6 653 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 ARMC7Q9H6L4 198 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 CWH43Q9H720 699 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 ZDHHC3Q9NYG2 299 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms