RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 FKBP7Q9Y680 259 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 DGKBQ9Y6T7 804 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 FADS2P1A8MWK0 482 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 PIRTP0C851 137 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 IGFBP5P24593 272 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 MINDY4Q4G0A6 757 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 PRAMEF17Q5VTA0 474 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 IQSEC1Q6DN90 963 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 STYK1Q6J9G0 422 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 FAM151BQ6UXP7 276 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 LINGO2Q7L985 606 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 PNPT1Q8TCS8 783 aaKnown RBP10.34□□□□□ -0.75
CLIP1-201ENST00000302528 CHST7Q9NS84 486 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 TMLHEQ9NVH6 421 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 SAGE2PA6NJ88 616 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 AKAP8O43823 692 aaKnown RBP10.34□□□□□ -0.75
CLIP1-201ENST00000302528 UNC5CO95185 931 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 DPEP1P16444 411 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 DLG4P78352 724 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 LIPEQ05469 1076 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 ARCQ7LC44 396 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 ZNF227Q86WZ6 799 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 KATNAL2Q8IYT4 538 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 OR8H3Q8N146 312 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 ZNF285Q96NJ3 590 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 ELAC1Q9H777 363 aaKnown RBP10.34□□□□□ -0.75
CLIP1-201ENST00000302528 TCF7L1Q9HCS4 588 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 TMPRSS4Q9NRS4 437 aa10.34□□□□□ -0.75
CLIP1-201ENST00000302528 DIP2CQ9Y2E4 1556 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 CLDN4O14493 209 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 PDCD5O14737 125 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 RGL2O15211 777 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 CTNNB1P35222 781 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 MTHFRP42898 656 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 ARCN1P48444 511 aaKnown RBP10.33□□□□□ -0.76
CLIP1-201ENST00000302528 PSEN2P49810 448 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 ADAM17P78536 824 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 SIM2Q14190 667 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-201ENST00000302528 CA9Q16790 459 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 CRYBG2Q8N1P7 616 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 GJD4Q96KN9 370 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-201ENST00000302528 TCF25Q9BQ70 676 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 ZNF350Q9GZX5 532 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 ADAM7Q9H2U9 754 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 RNF121Q9H920 327 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 GRHL1Q9NZI5 618 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 EIF3KQ9UBQ5 218 aaKnown RBP10.33□□□□□ -0.76
CLIP1-201ENST00000302528 ALG5Q9Y673 324 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 PTPRUQ92729 1446 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 F8VP50 259 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 ACKR2O00590 384 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 BCKDKO14874 412 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 MC4RP32245 332 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 RYKP34925 604 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 DCST1Q5T197 706 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 ADNP2Q6IQ32 1131 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 CERKQ8TCT0 537 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 SLC38A4Q969I6 547 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 GAD1Q99259 594 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 PDCD2LQ9BRP1 358 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 TBC1D10AQ9BXI6 508 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 PLCL2Q9UPR0 1127 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 MAN2B2Q9Y2E5 1009 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 RIMBP3CA6NJZ7 1639 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 RIMBP3BA6NNM3 1639 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 RIMBP3Q9UFD9 1639 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 TRIM64BA6NI03 449 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 TNFRSF11BO00300 401 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 ORC5O43913 435 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 KAT7O95251 611 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 PAPSS2O95340 614 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-201ENST00000302528 VIPP01282 170 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 TGFB3P10600 412 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 CD247P20963 164 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 PTGS2P35354 604 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 ROR2Q01974 943 aaKnown RBP10.33□□□□□ -0.76
CLIP1-201ENST00000302528 MXD1Q05195 221 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 TRIM28Q13263 835 aaKnown RBP10.33□□□□□ -0.76
CLIP1-201ENST00000302528 MAPK14Q16539 360 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 GCNT6Q5T4J0 391 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 NUP54Q7Z3B4 507 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 TMPRSS11BQ86T26 416 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 FAM83AQ86UY5 434 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 LAPTM4BQ86VI4 370 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 CHERPQ8IWX8 916 aaKnown RBP10.33□□□□□ -0.76
CLIP1-201ENST00000302528 C12orf50Q8NA57 414 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-201ENST00000302528 TCEAL3Q969E4 200 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 MTMR8Q96EF0 704 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 MFSD14AQ96MC6 490 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 TSSK3Q96PN8 268 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 GAL3ST4Q96RP7 486 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 ZNF700Q9H0M5 742 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 ANKZF1Q9H8Y5 726 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 AASSQ9UDR5 926 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 FADS3Q9Y5Q0 445 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 MAU2Q9Y6X3 613 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 SPATA31A3Q5VYP0 1347 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 KANTRA0A1W2PQU2 76 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 ENTPD5O75356 428 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 APOL3O95236 402 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms