RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 PTPRCAPQ14761 206 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 PID1Q7Z2X4 250 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 PEX26Q7Z412 305 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 KIAA1328Q86T90 577 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 ARL14Q8N4G2 192 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 FAM46DQ8NEK8 389 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 CCDC110Q8TBZ0 833 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 GLYATL1Q969I3 302 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 NXPE2Q96DL1 559 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 CCDC97Q96F63 343 aaPredicted RBP11.14□□□□□ -0.63
CLCC1-201ENST00000302500 ATXN7L3BQ96GX2 97 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 LIN37Q96GY3 246 aaPredicted RBP11.14□□□□□ -0.63
CLCC1-201ENST00000302500 OR2M4Q96R27 311 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 ZSCAN5AQ9BUG6 496 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 TLR10Q9BXR5 811 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 CARD9Q9H257 536 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 PKD2L2Q9NZM6 624 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 SIRPGQ9P1W8 387 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 KLHL8Q9P2G9 620 aaPredicted RBP11.14□□□□□ -0.63
CLCC1-201ENST00000302500 TBC1D29Q9UFV1 150 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 AMFRQ9UKV5 643 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 PCDHGA8Q9Y5G5 932 aa11.14□□□□□ -0.63
CLCC1-201ENST00000302500 ATRXP46100 2492 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 F5H423 210 aaPredicted RBP11.13□□□□□ -0.63
CLCC1-201ENST00000302500 LDB2O43679 373 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 TJP3O95049 919 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 IPO7O95373 1038 aaKnown RBP11.13□□□□□ -0.63
CLCC1-201ENST00000302500 BRAFP15056 766 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 CD1CP29017 333 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 CSF2RBP32927 897 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 RPIAP49247 311 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 ZNF140P52738 457 aaPredicted RBP11.13□□□□□ -0.63
CLCC1-201ENST00000302500 UBE2IP63279 158 aaKnown RBP11.13□□□□□ -0.63
CLCC1-201ENST00000302500 PEX6Q13608 980 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 TBC1D25Q3MII6 688 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 RBM44Q6ZP01 1051 aaKnown RBP11.13□□□□□ -0.63
CLCC1-201ENST00000302500 TAF8Q7Z7C8 310 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 CLEC14AQ86T13 490 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 CDKL3Q8IVW4 592 aaPredicted RBP11.13□□□□□ -0.63
CLCC1-201ENST00000302500 SYCE1Q8N0S2 351 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 GLIS1Q8NBF1 620 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 IPMKQ8NFU5 416 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 OR6C4Q8NGE1 309 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 WDR48Q8TAF3 677 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 SLC37A2Q8TED4 501 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 GRAMD1AQ96CP6 724 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 DEPDC7Q96QD5 511 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 GSDMCQ9BYG8 508 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 LRRN3Q9H3W5 708 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 RMI1Q9H9A7 625 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 TRIM39Q9HCM9 518 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 PDP2Q9P2J9 529 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 PRKAB1Q9Y478 270 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 KCTD3Q9Y597 815 aa11.13□□□□□ -0.63
CLCC1-201ENST00000302500 B4DGG1 531 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 GPR89AB7ZAQ6 455 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 KCNN4O15554 427 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 LIASO43766 372 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 USP12O75317 370 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 MPOP05164 745 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 GPR89BP0CG08 455 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 ILF3Q12906 894 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLCC1-201ENST00000302500 HS1BP3Q53T59 392 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 DOK6Q6PKX4 331 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 SLC30A9Q6PML9 568 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 CCNJLQ8IV13 435 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 CCDC112Q8NEF3 446 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 DDHD1Q8NEL9 900 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 CCHCR1Q8TD31 782 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 ZDHHC1Q8WTX9 485 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 UBE2Q2Q8WVN8 375 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 ATG4AQ8WYN0 398 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 GLMNQ92990 594 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 CRELD1Q96HD1 420 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 SLC46A1Q96NT5 459 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 SRPK1Q96SB4 655 aaKnown RBP11.12□□□□□ -0.63
CLCC1-201ENST00000302500 POLR1BQ9H9Y6 1135 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 BPIFA1Q9NP55 256 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 ARFGAP3Q9NP61 516 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 HACD3Q9P035 362 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 SCHIP1Q9P0W5 487 aaPredicted RBP11.12□□□□□ -0.63
CLCC1-201ENST00000302500 LRIT1Q9P2V4 623 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 RSPH14Q9UHP6 348 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 ACSL6Q9UKU0 697 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 SATB2Q9UPW6 733 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 ARL5AQ9Y689 179 aa11.12□□□□□ -0.63
CLCC1-201ENST00000302500 IGLV3-16A0A075B6K0 115 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 IGHV1OR21-1A0A087WYE8 117 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 TRBV5-4A0A0C4DH59 114 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 H7C0C1 242 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 H7C0S8 307 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 MTX2O75431 263 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 RPLP0P05388 317 aaKnown RBP11.11□□□□□ -0.63
CLCC1-201ENST00000302500 ACTR1BP42025 376 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 GPR3P46089 330 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 ATP5OP48047 213 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 CTSCP53634 463 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 ERVPABLB-1P60509 514 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 ACTR1AP61163 376 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 DMPKQ09013 629 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms