RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 PHF21BQ96EK2 531 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 TNIP3Q96KP6 325 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 CCDC115Q96NT0 180 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 NUSAP1Q9BXS6 441 aaKnown RBP13.76□□□□□ -0.21
KARS-201ENST00000302445 UGT2B28Q9BY64 529 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 EPS8L2Q9H6S3 715 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 SPC25Q9HBM1 224 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 WDR6Q9NNW5 1121 aaKnown RBP13.76□□□□□ -0.21
KARS-201ENST00000302445 COMMD8Q9NX08 183 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 ZIM2Q9NZV7 527 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 DNAJB9Q9UBS3 223 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 POLG2Q9UHN1 485 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 C3orf18Q9UK00 162 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 A3GALT2U3KPV4 340 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 COL4A4P53420 1690 aaPredicted RBP13.76□□□□□ -0.21
KARS-201ENST00000302445 ASNA1O43681 348 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 DYRK3O43781 588 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 UPK1BO75841 260 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 NADKO95544 446 aaPredicted RBP13.76□□□□□ -0.21
KARS-201ENST00000302445 IL7RP16871 459 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 PTPRAP18433 802 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 EIF2DP41214 584 aaKnown RBP13.76□□□□□ -0.21
KARS-201ENST00000302445 CHRNB3Q05901 458 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 POU6F1Q14863 301 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 CELF3Q5SZQ8 465 aaKnown RBP13.76□□□□□ -0.21
KARS-201ENST00000302445 RBM20Q5T481 1227 aaKnown RBP13.76□□□□□ -0.21
KARS-201ENST00000302445 HECTD2Q5U5R9 776 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 KIAA0319Q5VV43 1072 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 ISCA2Q86U28 154 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 LINC01465Q8N7H1 131 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 KIAA1958Q8N8K9 716 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 SMG8Q8ND04 991 aaKnown RBP13.76□□□□□ -0.21
KARS-201ENST00000302445 YIPF6Q96EC8 236 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 ZNF486Q96H40 463 aaPredicted RBP13.76□□□□□ -0.21
KARS-201ENST00000302445 IL12RB2Q99665 862 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 DGCR6LQ9BY27 220 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 DUSP16Q9BY84 665 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 POPDC3Q9HBV1 291 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 TMPRSS4Q9NRS4 437 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 HSPE1-MOB4S4R3N1 261 aa13.76□□□□□ -0.21
KARS-201ENST00000302445 WDR90Q96KV7 1748 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 FAM172BPA6NC97 362 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 G3V2T6 193 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 FAM72CH0Y354 149 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 IFRD1O00458 451 aaPredicted RBP13.75□□□□□ -0.21
KARS-201ENST00000302445 SLC16A6O15403 523 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 HUS1O60921 280 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 PARNO95453 639 aaKnown RBP13.75□□□□□ -0.21
KARS-201ENST00000302445 F9P00740 461 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 GJB1P08034 283 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 ANXA6P08133 673 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 HGFP14210 728 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 CXCR4P61073 352 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 SH3BP2P78314 561 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 GRB7Q14451 532 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 KCTD2Q14681 263 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 PYCR3Q53H96 274 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 FAM72AQ5TYM5 149 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 ZNF691Q5VV52 312 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 DCAF15Q66K64 600 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 GLYATQ6IB77 296 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 FAM72DQ6L9T8 149 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 LIMS2Q7Z4I7 341 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 STK32CQ86UX6 486 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 FAM72BQ86X60 149 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 HID1Q8IV36 788 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 KIAA2013Q8IYS2 634 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 LILRB4Q8NHJ6 448 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 RHEBL1Q8TAI7 183 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 FAR1Q8WVX9 515 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 TUBGCP3Q96CW5 907 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 REXO5Q96IC2 774 aaKnown RBP13.75□□□□□ -0.21
KARS-201ENST00000302445 ZNF560Q96MR9 790 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 ZNF300Q96RE9 604 aaPredicted RBP13.75□□□□□ -0.21
KARS-201ENST00000302445 MBOAT4Q96T53 435 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 GLOD4Q9HC38 313 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 NPAP1Q9NZP6 1156 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 ZNF112Q9UJU3 913 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 ZNF229Q9UJW7 825 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 POU2F3Q9UKI9 436 aa13.75□□□□□ -0.21
KARS-201ENST00000302445 FAM234BA2RU67 622 aa13.74□□□□□ -0.21
KARS-201ENST00000302445 ASPDHA6ND91 283 aa13.74□□□□□ -0.21
KARS-201ENST00000302445 CCDC154A6NI56 674 aa13.74□□□□□ -0.21
KARS-201ENST00000302445 TTC34A8MYJ7 566 aa13.74□□□□□ -0.21
KARS-201ENST00000302445 NCK1P16333 377 aa13.74□□□□□ -0.21
KARS-201ENST00000302445 PNPLA4P41247 253 aa13.74□□□□□ -0.21
KARS-201ENST00000302445 PLK1P53350 603 aa13.74□□□□□ -0.21
KARS-201ENST00000302445 ISL1P61371 349 aa13.74□□□□□ -0.21
KARS-201ENST00000302445 PITX1P78337 314 aaPredicted RBP13.74□□□□□ -0.21
KARS-201ENST00000302445 CD47Q08722 323 aa13.74□□□□□ -0.21
KARS-201ENST00000302445 FADDQ13158 208 aa13.74□□□□□ -0.21
KARS-201ENST00000302445 DNASE1L3Q13609 305 aa13.74□□□□□ -0.21
KARS-201ENST00000302445 DSG2Q14126 1118 aa13.74□□□□□ -0.21
KARS-201ENST00000302445 SF3B4Q15427 424 aaKnown RBP eCLIP13.74□□□□□ -0.21
KARS-201ENST00000302445 PGS1Q32NB8 556 aa13.74□□□□□ -0.21
KARS-201ENST00000302445 ZIK1Q3SY52 487 aaPredicted RBP13.74□□□□□ -0.21
KARS-201ENST00000302445 RABL3Q5HYI8 236 aa13.74□□□□□ -0.21
KARS-201ENST00000302445 SYT6Q5T7P8 510 aaPredicted RBP13.74□□□□□ -0.21
KARS-201ENST00000302445 P2RY8Q86VZ1 359 aa13.74□□□□□ -0.21
KARS-201ENST00000302445 LRRC49Q8IUZ0 686 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms