RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 GRID2O43424 1007 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 BCAS2O75934 225 aaPredicted RBP13.22□□□□□ -0.29
CASC4-201ENST00000299957 SNAP29O95721 258 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 CYBBP04839 570 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 GSK3BP49841 420 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 RHDQ02161 417 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 TMEM135Q86UB9 458 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 CAMKK2Q96RR4 588 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 ZNF556Q9HAH1 456 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.22□□□□□ -0.29
CASC4-201ENST00000299957 SLC8A2Q9UPR5 921 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 ECM29Q5VYK3 1845 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 MGAT4DA6NG13 374 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 ASLP04424 464 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 KRT8P05787 483 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 MYCLP1P12525 358 aaPredicted RBP13.22□□□□□ -0.29
CASC4-201ENST00000299957 POU2F1P14859 743 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 ARRB2P32121 409 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 ATP5C1P36542 298 aaKnown RBP13.22□□□□□ -0.29
CASC4-201ENST00000299957 SIRPB2Q5JXA9 342 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 BROXQ5VW32 411 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 FBXL22Q6P050 247 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 CRTC3Q6UUV7 619 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 MON1AQ86VX9 555 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.22□□□□□ -0.29
CASC4-201ENST00000299957 SPPL2BQ8TCT7 592 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 OCEL1Q9H607 264 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 NMUR1Q9HB89 426 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 HS3ST4Q9Y661 456 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 BCORQ6W2J9 1755 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 G3V2T6 193 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 HTRA2O43464 458 aaPredicted RBP13.22□□□□□ -0.29
CASC4-201ENST00000299957 PKMP14618 531 aaKnown RBP13.22□□□□□ -0.29
CASC4-201ENST00000299957 ZNF7P17097 686 aaPredicted RBP13.22□□□□□ -0.29
CASC4-201ENST00000299957 CDH2P19022 906 aaPredicted RBP13.22□□□□□ -0.29
CASC4-201ENST00000299957 ELK4P28324 431 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 CCL23P55773 120 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 MAP3K10Q02779 954 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 ENPEPQ07075 957 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 TNK2Q07912 1038 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 ACAP2Q15057 778 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 RGS21Q2M5E4 152 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 PRMT9Q6P2P2 845 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 KBTBD6Q86V97 674 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 RTL3Q8N8U3 475 aaKnown RBP13.22□□□□□ -0.29
CASC4-201ENST00000299957 C12orf43Q96C57 262 aaKnown RBP13.22□□□□□ -0.29
CASC4-201ENST00000299957 LRRC58Q96CX6 371 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 ZFYVE19Q96K21 471 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 EBPLQ9BY08 206 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 TNKS2Q9H2K2 1166 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 EBF1Q9UH73 591 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 SLC13A4Q9UKG4 626 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 IGKV6-21A0A0C4DH24 114 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 OR1I1O60431 355 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 PQBP1O60828 265 aaKnown RBP13.21□□□□□ -0.29
CASC4-201ENST00000299957 COL6A2P12110 1019 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 LPOP22079 712 aaPredicted RBP13.21□□□□□ -0.29
CASC4-201ENST00000299957 PROZP22891 400 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 OR1D2P34982 312 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 CPOXP36551 454 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 RFX3P48380 749 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 PFKPQ01813 784 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 DMPKQ09013 629 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 PAFAH1B3Q15102 231 aaKnown RBP13.21□□□□□ -0.29
CASC4-201ENST00000299957 UGT3A1Q6NUS8 523 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 CENPNQ96H22 339 aaPredicted RBP13.21□□□□□ -0.29
CASC4-201ENST00000299957 LRCH3Q96II8 777 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 MIR1-1HGQ9H1L0 117 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 CCSER2Q9H7U1 834 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 FCF1Q9Y324 198 aaKnown RBP13.21□□□□□ -0.29
CASC4-201ENST00000299957 MAGED1Q9Y5V3 778 aaPredicted RBP13.21□□□□□ -0.29
CASC4-201ENST00000299957 LRP5O75197 1615 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 A0A0D9SEW6 157 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 TMEM247A6NEH6 219 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 C5orf58C9J3I9 102 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 DCLK1O15075 740 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 ONECUT3O60422 494 aaPredicted RBP13.21□□□□□ -0.29
CASC4-201ENST00000299957 WDR47O94967 919 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 KRT6AP02538 564 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 KRT6BP04259 564 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 SLC7A1P30825 629 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 KRT6CP48668 564 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 NEK2P51955 445 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 LCP2Q13094 533 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 TUSC3Q13454 348 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 UAP1L1Q3KQV9 507 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 TTLL9Q3SXZ7 439 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 FOXB2Q5VYV0 432 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 PRR23BQ6ZRT6 265 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 CD84Q9UIB8 345 aa13.21□□□□□ -0.29
CASC4-201ENST00000299957 ARVCFO00192 962 aa13.21□□□□□ -0.3
CASC4-201ENST00000299957 SOCS2O14508 198 aa13.21□□□□□ -0.3
CASC4-201ENST00000299957 MTX2O75431 263 aa13.21□□□□□ -0.3
CASC4-201ENST00000299957 ANXA6P08133 673 aa13.21□□□□□ -0.3
CASC4-201ENST00000299957 FOXA1P55317 472 aa13.21□□□□□ -0.3
CASC4-201ENST00000299957 MAP2K5Q13163 448 aa13.21□□□□□ -0.3
CASC4-201ENST00000299957 DEPDC1Q5TB30 811 aa13.21□□□□□ -0.3
CASC4-201ENST00000299957 PAGE2Q7Z2X7 111 aa13.21□□□□□ -0.3
CASC4-201ENST00000299957 GALNT10Q86SR1 603 aa13.21□□□□□ -0.3
CASC4-201ENST00000299957 SLCO6A1Q86UG4 719 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms