RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 TMCC1O94876 653 aa13.52□□□□□ -0.25
CDH8-201ENST00000299345 CTPS1P17812 591 aa13.52□□□□□ -0.25
CDH8-201ENST00000299345 GPX3P22352 226 aa13.52□□□□□ -0.25
CDH8-201ENST00000299345 CCL23P55773 120 aa13.52□□□□□ -0.25
CDH8-201ENST00000299345 SMAD3P84022 425 aaKnown RBP13.52□□□□□ -0.25
CDH8-201ENST00000299345 PSAPL1Q6NUJ1 521 aa13.52□□□□□ -0.25
CDH8-201ENST00000299345 GPRIN3Q6ZVF9 776 aa13.52□□□□□ -0.25
CDH8-201ENST00000299345 FNDC5Q8NAU1 212 aa13.52□□□□□ -0.25
CDH8-201ENST00000299345 DNAJB14Q8TBM8 379 aa13.52□□□□□ -0.25
CDH8-201ENST00000299345 EGFL8Q99944 293 aa13.52□□□□□ -0.25
CDH8-201ENST00000299345 SPATA16Q9BXB7 569 aa13.52□□□□□ -0.25
CDH8-201ENST00000299345 TM6SF2Q9BZW4 377 aa13.52□□□□□ -0.25
CDH8-201ENST00000299345 CLPBQ9H078 707 aa13.52□□□□□ -0.25
CDH8-201ENST00000299345 SYNCRIPO60506 623 aaKnown RBP13.51□□□□□ -0.25
CDH8-201ENST00000299345 STC2O76061 302 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 RPL5P46777 297 aaKnown RBP13.51□□□□□ -0.25
CDH8-201ENST00000299345 AGTR2P50052 363 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 ROR2Q01974 943 aaKnown RBP13.51□□□□□ -0.25
CDH8-201ENST00000299345 HMGCLL1Q8TB92 370 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 METTL6Q8TCB7 284 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 DIS3LQ8TF46 1054 aaKnown RBP13.51□□□□□ -0.25
CDH8-201ENST00000299345 TMEM175Q9BSA9 504 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 C1orf50Q9BV19 199 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 GALPQ9UBC7 116 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 SMIM31A0A1B0GVY4 71 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 SAC3D1A6NKF1 404 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 AOC2O75106 756 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 GMNNO75496 209 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 ETS2P15036 469 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 ITGB6P18564 788 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 SUOXP51687 545 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 SH3BGRP55822 239 aaPredicted RBP13.51□□□□□ -0.25
CDH8-201ENST00000299345 CNPY1Q3B7I2 92 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 MTX3Q5HYI7 312 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 UGT2A3Q6UWM9 527 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 SATL1Q86VE3 508 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 PIANPQ8IYJ0 282 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 STK40Q8N2I9 435 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 GALNT15Q8N3T1 639 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 EEF1AKMT1Q8WVE0 214 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 TRIB3Q96RU7 358 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 TMEM79Q9BSE2 394 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 CCDC154A6NI56 674 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 BNIP3LO60238 219 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 CYBBP04839 570 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 HMOX2P30519 316 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 DIO3P55073 304 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 NAA20P61599 178 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 UGT3A2Q3SY77 523 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 ARMC12Q5T9G4 340 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 FOXB2Q5VYV0 432 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 KANK2Q63ZY3 851 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 HACD2Q6Y1H2 254 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 SPATA19Q7Z5L4 167 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 FUNDC1Q8IVP5 155 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 CANT1Q8WVQ1 401 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 FUBP1Q96AE4 644 aaKnown RBP13.51□□□□□ -0.25
CDH8-201ENST00000299345 NMD3Q96D46 503 aaKnown RBP13.51□□□□□ -0.25
CDH8-201ENST00000299345 SCLYQ96I15 445 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 ACOX2Q99424 681 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 TTLL2Q9BWV7 592 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 RETREG1Q9H6L5 497 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 CAAP1Q9H8G2 361 aa13.51□□□□□ -0.25
CDH8-201ENST00000299345 EIF2B4Q9UI10 523 aaKnown RBP13.51□□□□□ -0.25
CDH8-201ENST00000299345 CENPFP49454 3210 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 KLKB1P03952 638 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 UROSP10746 265 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 RGS4P49798 205 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 PLOD1Q02809 727 aaPredicted RBP13.5□□□□□ -0.25
CDH8-201ENST00000299345 RBBP5Q15291 538 aaKnown RBP13.5□□□□□ -0.25
CDH8-201ENST00000299345 ATP6AP1LQ52LC2 224 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 SPPL2CQ8IUH8 684 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 OR6K2Q8NGY2 324 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 ZNF483Q8TF39 744 aaPredicted RBP13.5□□□□□ -0.25
CDH8-201ENST00000299345 TMEM169Q96HH4 297 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 SH3GL3Q99963 347 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 GRIP2Q9C0E4 1043 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 TMEM181Q9P2C4 612 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 DHRS12A0PJE2 317 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 INPP4BO15327 924 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 FAM117BQ6P1L5 589 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 CHST9Q7L1S5 443 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 RETREG3Q86VR2 466 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 VPS33AQ96AX1 596 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 PRICKLE1Q96MT3 831 aaPredicted RBP13.5□□□□□ -0.25
CDH8-201ENST00000299345 AFF4Q9UHB7 1163 aaKnown RBP13.5□□□□□ -0.25
CDH8-201ENST00000299345 FCF1Q9Y324 198 aaKnown RBP13.5□□□□□ -0.25
CDH8-201ENST00000299345 A0A0U1RQS6 177 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 PRMT5O14744 637 aaPredicted RBP13.5□□□□□ -0.25
CDH8-201ENST00000299345 TRIM24O15164 1050 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 KATNA1O75449 491 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 SLC22A3O75751 556 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 OR4F21O95013 312 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 TRIM16O95361 564 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 WISP3O95389 354 aaPredicted RBP13.5□□□□□ -0.25
CDH8-201ENST00000299345 ESRRBO95718 433 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 ESR1P03372 595 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 C8BP07358 591 aa13.5□□□□□ -0.25
CDH8-201ENST00000299345 ZNF7P17097 686 aaPredicted RBP13.5□□□□□ -0.25
CDH8-201ENST00000299345 CAPN3P20807 821 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms