RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 PSKH2Q96QS6 385 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 C17orf80Q9BSJ5 609 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 WWOXQ9NZC7 414 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 ADAMTS6Q9UKP5 1117 aa9.25□□□□□ -0.93
PRDM9-201ENST00000296682 NUP214P35658 2090 aaPredicted RBP9.24□□□□□ -0.93
PRDM9-201ENST00000296682 OBSL1O75147 1896 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 A0A1B0GTL3 188 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 SLCO1B7G3V0H7 640 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 PGM3O95394 542 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 C8AP07357 584 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 GRIA3P42263 894 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 PRKAA2P54646 552 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 NTHL1P78549 312 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 PFKPQ01813 784 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 CPSF6Q16630 551 aaKnown RBP eCLIP9.24□□□□□ -0.93
PRDM9-201ENST00000296682 TIGD2Q4W5G0 525 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 DHDDSQ86SQ9 333 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 CLYBLQ8N0X4 340 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 RP9Q8TA86 221 aaKnown RBP9.24□□□□□ -0.93
PRDM9-201ENST00000296682 RDH11Q8TC12 318 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 PTCD2Q8WV60 388 aaKnown RBP9.24□□□□□ -0.93
PRDM9-201ENST00000296682 FEM1AQ9BSK4 669 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 VCX3BQ9H321 246 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 ZFYVE1Q9HBF4 777 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 ZNF334Q9HCZ1 680 aaPredicted RBP9.24□□□□□ -0.93
PRDM9-201ENST00000296682 A0A0J9YYE9 177 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 PRR23AA6NEV1 266 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 UBFD1O14562 309 aaKnown RBP9.24□□□□□ -0.93
PRDM9-201ENST00000296682 LIN7AO14910 233 aaPredicted RBP9.24□□□□□ -0.93
PRDM9-201ENST00000296682 SNRPB2P08579 225 aaKnown RBP9.24□□□□□ -0.93
PRDM9-201ENST00000296682 ZNF37AP17032 561 aaPredicted RBP9.24□□□□□ -0.93
PRDM9-201ENST00000296682 PSMA3P25788 255 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 CPOXP36551 454 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 CTSOP43234 321 aaPredicted RBP9.24□□□□□ -0.93
PRDM9-201ENST00000296682 STC1P52823 247 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 NFYCQ13952 458 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 CEACAM7Q14002 265 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 UGT3A1Q6NUS8 523 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 RFLNAQ6ZTI6 216 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 GALNT7Q86SF2 657 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 TSPAN33Q86UF1 283 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 TMEM151AQ8N4L1 468 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 PBXIP1Q96AQ6 731 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 GPR78Q96P69 363 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 TSEN34Q9BSV6 310 aaKnown RBP9.24□□□□□ -0.93
PRDM9-201ENST00000296682 C2orf49Q9BVC5 232 aaPredicted RBP9.24□□□□□ -0.93
PRDM9-201ENST00000296682 BBS2Q9BXC9 721 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 NOL11Q9H8H0 719 aaKnown RBP9.24□□□□□ -0.93
PRDM9-201ENST00000296682 ZNF212Q9UDV6 495 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 PRKAG2Q9UGJ0 569 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 CDH23Q9H251 3354 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 WASH4PA8MWX3 477 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 CDK14O94921 469 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 SLC2A4P14672 509 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 NCK1P16333 377 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 POLD2P49005 469 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 CCNIQ14094 377 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 UNC50Q53HI1 259 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 AFTPHQ6ULP2 937 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 MBOAT1Q6ZNC8 495 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 SERPINA9Q86WD7 417 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 RALGPS2Q86X27 583 aaPredicted RBP9.24□□□□□ -0.93
PRDM9-201ENST00000296682 PDZD8Q8NEN9 1154 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 CYB5D2Q8WUJ1 264 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 NSMCE3Q96MG7 304 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 ECSITQ9BQ95 431 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 RTKNQ9BST9 563 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 KLHL4Q9C0H6 718 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 IL37Q9NZH6 218 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 THEGQ9P2T0 379 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 CROTQ9UKG9 612 aa9.24□□□□□ -0.93
PRDM9-201ENST00000296682 LTBP2Q14767 1821 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 ARHGAP10A1A4S6 786 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 UPK3BL1B0FP48 263 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 UPK3BL2E5RIL1 263 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 KDELR3O43731 214 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 FKBP6O75344 327 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 PIM1P11309 404 aaPredicted RBP9.23□□□□□ -0.93
PRDM9-201ENST00000296682 IMPDH1P20839 514 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 ARF5P84085 180 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 CDC16Q13042 620 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 RBBP5Q15291 538 aaKnown RBP9.23□□□□□ -0.93
PRDM9-201ENST00000296682 SFT2D3Q587I9 215 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 SLC39A5Q6ZMH5 540 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 OR52B6Q8NGF0 335 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 LPGAT1Q92604 370 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 LRCH3Q96II8 777 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 TBCDQ9BTW9 1192 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 MTRRQ9UBK8 725 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 KLQ9UEF7 1012 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 INSL5Q9Y5Q6 135 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 SLC4A7Q9Y6M7 1214 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 INPP4BO15327 924 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 TIPRLO75663 272 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 CAPNS1P04632 268 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 PCNAP12004 261 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 CD1DP15813 335 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 HMGA1P17096 107 aaKnown RBP9.23□□□□□ -0.93
PRDM9-201ENST00000296682 CD70P32970 193 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 SLC44A4Q53GD3 710 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms