RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 HLA-DQA2P01906 255 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 ALOX12P18054 663 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 MTX3Q5HYI7 312 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 ATXN7L2Q5T6C5 722 aaPredicted RBP17.14■□□□□ 0.33
CDCP1-201ENST00000296129 PRR23CQ6ZRP0 262 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 CHSY3Q70JA7 882 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 HPS6Q86YV9 775 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 PHYKPLQ8IUZ5 450 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 DCBLD1Q8N8Z6 715 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 TWNKQ96RR1 684 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 RNF39Q9H2S5 420 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 HSPA7P48741 367 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 BIKQ13323 160 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 AGMOQ6ZNB7 445 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 ZNF540Q8NDQ6 660 aa17.14■□□□□ 0.33
CDCP1-201ENST00000296129 SMIM31A0A1B0GVY4 71 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 OR6B1O95007 311 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 PGM3O95394 542 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 BUD31P41223 144 aaPredicted RBP17.13■□□□□ 0.33
CDCP1-201ENST00000296129 PPIGQ13427 754 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDCP1-201ENST00000296129 HNRNPDQ14103 355 aaKnown RBP17.13■□□□□ 0.33
CDCP1-201ENST00000296129 ZNF57Q68EA5 555 aaPredicted RBP17.13■□□□□ 0.33
CDCP1-201ENST00000296129 SIAH1Q8IUQ4 282 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 DSELQ8IZU8 1212 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 OR2T12Q8NG77 320 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 RPL26L1Q9UNX3 145 aaKnown RBP17.13■□□□□ 0.33
CDCP1-201ENST00000296129 SUV39H1O43463 412 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 WFS1O76024 890 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 CCNDBP1O95273 360 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 SLC6A2P23975 617 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 MANFP55145 182 aaKnown RBP17.13■□□□□ 0.33
CDCP1-201ENST00000296129 GTF2H2Q13888 395 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 TOMM20Q15388 145 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 GTF2H2CQ6P1K8 395 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 RBM15BQ8NDT2 890 aaKnown RBP17.13■□□□□ 0.33
CDCP1-201ENST00000296129 NPLOC4Q8TAT6 608 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 FNDC11Q9BVV2 318 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 CNTN3Q9P232 1028 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 ADGRE2Q9UHX3 823 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 OR10H3O60404 316 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 PTPN2P17706 415 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 UGT2B15P54855 530 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 POU5F1Q01860 360 aaKnown RBP17.13■□□□□ 0.33
CDCP1-201ENST00000296129 ZNF781Q8N8C0 355 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 AP2M1Q96CW1 435 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 PHPT1Q9NRX4 125 aaPredicted RBP17.13■□□□□ 0.33
CDCP1-201ENST00000296129 ARL5AQ9Y689 179 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 STK16O75716 305 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 RNASEH2AO75792 299 aaKnown RBP17.13■□□□□ 0.33
CDCP1-201ENST00000296129 CLDN9O95484 217 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 METTL18O95568 372 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 PRNPP04156 253 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 AP1S1P61966 158 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 USP46P62068 366 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.13■□□□□ 0.33
CDCP1-201ENST00000296129 HEATR4Q86WZ0 1026 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 RPL10LQ96L21 214 aaKnown RBP17.13■□□□□ 0.33
CDCP1-201ENST00000296129 ATG10Q9H0Y0 220 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 FAM83DQ9H4H8 585 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 POLR3BQ9NW08 1133 aaPredicted RBP17.13■□□□□ 0.33
CDCP1-201ENST00000296129 MAT2BQ9NZL9 334 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 TLR6Q9Y2C9 796 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 PLIN3O60664 434 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 TIPRLO75663 272 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 TMEM63AO94886 807 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 CCNYL3P0C7X3 344 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 VPS26BQ4G0F5 336 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 TRMT10BQ6PF06 316 aaKnown RBP17.13■□□□□ 0.33
CDCP1-201ENST00000296129 ZDHHC24Q6UX98 284 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 C7orf61Q8IZ16 206 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 OSBPL11Q9BXB4 747 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 SLITRK2Q9H156 845 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 AKAP7Q9P0M2 348 aaPredicted RBP17.13■□□□□ 0.33
CDCP1-201ENST00000296129 CDH22Q9UJ99 828 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 AP4B1Q9Y6B7 739 aa17.13■□□□□ 0.33
CDCP1-201ENST00000296129 UGT1A9O60656 530 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 HIST1H2ABP04908 130 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 CYP4B1P13584 511 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 SSR2P43308 183 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 C21orf59P57076 290 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 MTAPQ13126 283 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 REP15Q6BDI9 236 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 KIAA0408Q6ZU52 694 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 HIST3H2AQ7L7L0 130 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 SPPL2CQ8IUH8 684 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 PNPT1Q8TCS8 783 aaKnown RBP17.12■□□□□ 0.33
CDCP1-201ENST00000296129 HIST1H2ACQ93077 130 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 POLR1BQ9H9Y6 1135 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 SLC28A3Q9HAS3 691 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 UGT1A7Q9HAW7 530 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 UGT1A10Q9HAW8 530 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 UGT1A8Q9HAW9 530 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 SLC45A1Q9Y2W3 748 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 A0A1W2PQ67 120 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 NRP1O14786 923 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 PDE9AO76083 593 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 POP4O95707 220 aaKnown RBP17.12■□□□□ 0.33
CDCP1-201ENST00000296129 SLC1A2P43004 574 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 RPIAP49247 311 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 LPCAT4Q643R3 524 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms