RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 PFKPQ01813 784 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 RALGDSQ12967 914 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 HSD11B1LQ7Z5J1 315 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 ISCA2Q86U28 154 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 NXPE1Q8N323 547 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 KCNJ9Q92806 393 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 SLC30A3Q99726 388 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 CLPBQ9H078 707 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 ALG9Q9H6U8 611 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 CD84Q9UIB8 345 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 CD207Q9UJ71 328 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 TMEM265A0A087WTH1 108 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 CHRM3P20309 590 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 RPS3P23396 243 aaKnown RBP eCLIP22.67■■□□□ 1.22
PTX3-201ENST00000295927 PRKAA2P54646 552 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 ATP13A5Q4VNC0 1218 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 TRPM8Q7Z2W7 1104 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 SIDT2Q8NBJ9 832 aaKnown RBP22.67■■□□□ 1.22
PTX3-201ENST00000295927 ARRDC3Q96B67 414 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 PTERQ96BW5 349 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 SORT1Q99523 831 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 KCNK13Q9HB14 408 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 ABCF3Q9NUQ8 709 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 CACNA2D2Q9NY47 1150 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 TRMT6Q9UJA5 497 aaKnown RBP22.67■■□□□ 1.22
PTX3-201ENST00000295927 PLXNA2O75051 1894 aa22.66■■□□□ 1.22
PTX3-201ENST00000295927 IQCF5A8MTL0 148 aa22.66■■□□□ 1.22
PTX3-201ENST00000295927 E5RI56 91 aa22.66■■□□□ 1.22
PTX3-201ENST00000295927 KITP10721 976 aa22.66■■□□□ 1.22
PTX3-201ENST00000295927 ATP5F1P24539 256 aaPredicted RBP22.66■■□□□ 1.22
PTX3-201ENST00000295927 ITGB7P26010 798 aa22.66■■□□□ 1.22
PTX3-201ENST00000295927 MMP12P39900 470 aa22.66■■□□□ 1.22
PTX3-201ENST00000295927 ERAP2Q6P179 960 aa22.66■■□□□ 1.22
PTX3-201ENST00000295927 NUDT18Q6ZVK8 323 aa22.66■■□□□ 1.22
PTX3-201ENST00000295927 TXNDC5Q8NBS9 432 aaKnown RBP22.66■■□□□ 1.22
PTX3-201ENST00000295927 CCT6BQ92526 530 aa22.66■■□□□ 1.22
PTX3-201ENST00000295927 MARCOQ9UEW3 520 aaPredicted RBP22.66■■□□□ 1.22
PTX3-201ENST00000295927 A0A0G2JND7 137 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 NEMP2A6NFY4 417 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 TMEM114B3SHH9 223 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 H3BMM5 538 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 H3BQ06 376 aaPredicted RBP22.65■■□□□ 1.22
PTX3-201ENST00000295927 KIAA0754O94854 1291 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 EPHX1P07099 455 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 GALK1P51570 392 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 PTRHD1Q6GMV3 140 aaKnown RBP22.65■■□□□ 1.22
PTX3-201ENST00000295927 YTHDF3Q7Z739 585 aaKnown RBP22.65■■□□□ 1.22
PTX3-201ENST00000295927 GIMAP7Q8NHV1 300 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 CD200R1Q8TD46 325 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 CSGALNACT1Q8TDX6 532 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 NAT14Q8WUY8 206 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 MOCOSQ96EN8 888 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 SUN2Q9UH99 717 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 DNAJC16Q9Y2G8 782 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 PRSS21Q9Y6M0 314 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 ATXN2Q99700 1313 aaKnown RBP22.65■■□□□ 1.22
PTX3-201ENST00000295927 SKIV2L2P42285 1042 aaKnown RBP22.65■■□□□ 1.22
PTX3-201ENST00000295927 KCNC1P48547 511 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 NAGLUP54802 743 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 CCDC121Q6ZUS5 278 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 Q6ZVL8 140 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 CLDN19Q8N6F1 224 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 PPP4R1Q8TF05 950 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 DERL2Q9GZP9 239 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 SARS2Q9NP81 518 aaKnown RBP22.65■■□□□ 1.22
PTX3-201ENST00000295927 PRSS16Q9NQE7 514 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 ACSS2Q9NR19 701 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 ZDHHC3Q9NYG2 299 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 GNPTGQ9UJJ9 305 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 ITM2BQ9Y287 266 aa22.65■■□□□ 1.22
PTX3-201ENST00000295927 PIKFYVEQ9Y2I7 2098 aa22.64■■□□□ 1.21
PTX3-201ENST00000295927 KCNA5P22460 613 aa22.64■■□□□ 1.21
PTX3-201ENST00000295927 ETV3P41162 512 aa22.64■■□□□ 1.21
PTX3-201ENST00000295927 CLCN7P51798 805 aa22.64■■□□□ 1.21
PTX3-201ENST00000295927 ARFIP2P53365 341 aa22.64■■□□□ 1.21
PTX3-201ENST00000295927 AAK1Q2M2I8 961 aa22.64■■□□□ 1.21
PTX3-201ENST00000295927 UGT3A1Q6NUS8 523 aa22.64■■□□□ 1.21
PTX3-201ENST00000295927 NKAPQ8N5F7 415 aaKnown RBP22.64■■□□□ 1.21
PTX3-201ENST00000295927 ERLEC1Q96DZ1 483 aa22.64■■□□□ 1.21
PTX3-201ENST00000295927 TMEM120AQ9BXJ8 343 aa22.64■■□□□ 1.21
PTX3-201ENST00000295927 FAM83DQ9H4H8 585 aa22.64■■□□□ 1.21
PTX3-201ENST00000295927 HSPA4LO95757 839 aa22.63■■□□□ 1.21
PTX3-201ENST00000295927 HNRNPLP14866 589 aaKnown RBP eCLIP22.63■■□□□ 1.21
PTX3-201ENST00000295927 DCDC1P59894 354 aa22.63■■□□□ 1.21
PTX3-201ENST00000295927 DNAJB13P59910 316 aa22.63■■□□□ 1.21
PTX3-201ENST00000295927 ASPHQ12797 758 aa22.63■■□□□ 1.21
PTX3-201ENST00000295927 OR4D1Q15615 310 aa22.63■■□□□ 1.21
PTX3-201ENST00000295927 LRRK1Q38SD2 2015 aa22.63■■□□□ 1.21
PTX3-201ENST00000295927 LIPIQ6XZB0 460 aa22.63■■□□□ 1.21
PTX3-201ENST00000295927 PIWIL2Q8TC59 973 aaKnown RBP22.63■■□□□ 1.21
PTX3-201ENST00000295927 SCAMP4Q969E2 229 aa22.63■■□□□ 1.21
PTX3-201ENST00000295927 ULK4Q96C45 1275 aa22.63■■□□□ 1.21
PTX3-201ENST00000295927 P2RY13Q9BPV8 354 aa22.63■■□□□ 1.21
PTX3-201ENST00000295927 SPATA16Q9BXB7 569 aa22.63■■□□□ 1.21
PTX3-201ENST00000295927 DRC3Q9H069 523 aa22.63■■□□□ 1.21
PTX3-201ENST00000295927 TFB2MQ9H5Q4 396 aaKnown RBP22.63■■□□□ 1.21
PTX3-201ENST00000295927 TMPRSS11EQ9UL52 423 aa22.63■■□□□ 1.21
PTX3-201ENST00000295927 DHRS7Q9Y394 339 aa22.63■■□□□ 1.21
PTX3-201ENST00000295927 STON1Q9Y6Q2 735 aa22.63■■□□□ 1.21
PTX3-201ENST00000295927 A8MT66 165 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms