RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 GPR33Q49SQ1 333 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 GCNT7Q6ZNI0 430 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 MMAAQ8IVH4 418 aaKnown RBP17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 OTUB2Q96DC9 234 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 C1orf50Q9BV19 199 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 MYLK2Q9H1R3 596 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 WDR26Q9H7D7 661 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 STMN3Q9NZ72 180 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 GNPDA1P46926 289 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 ESRP1Q6NXG1 681 aaKnown RBP17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 COMMD2Q86X83 199 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 OR2AP1Q8NGE2 309 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 ZSCAN18Q8TBC5 510 aaPredicted RBP17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 POP5Q969H6 163 aaKnown RBP17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 PCDHGB3Q9Y5G1 929 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 ATP6AP2A0A1C7CYW4 349 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 TCRBV7S2A1N4TA0A589 114 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 PIRO00625 290 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 SLC25A12O75746 678 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 ATP6AP2O75787 350 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 SLC35G6P0C7Q6 338 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 ITGA2P17301 1181 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 GATMP50440 423 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 KCNQ1P51787 676 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 LIMK2P53671 638 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 INCA1Q0VD86 236 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 ZNF776Q68DI1 518 aaPredicted RBP17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 TYW3Q6IPR3 259 aaKnown RBP17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 AMZ2Q86W34 360 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 ADGRG2Q8IZP9 1017 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 C2orf73Q8N5S3 287 aaPredicted RBP17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 DLG3Q92796 817 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 NUS1Q96E22 293 aa17.6■□□□□ 0.41
CDC42EP3-201ENST00000295324 PHRF1Q9P1Y6 1649 aaKnown RBP17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 RGSL1A5PLK6 1076 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 PNLIPRP1P54315 467 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 ARSIQ5FYB1 569 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 CCNYL2Q5T2Q4 361 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 LDB1Q86U70 411 aaPredicted RBP17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 C9orf16Q9BUW7 83 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 ATG10Q9H0Y0 220 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 C8GP07360 202 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 BUD31P41223 144 aaPredicted RBP17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 PPIDQ08752 370 aaKnown RBP17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 KLK6Q92876 244 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 LMLNQ96KR4 655 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 CXorf56Q9H5V9 222 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 OR52E6Q96RD3 313 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 ZNF607Q96SK3 696 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 CLDN9O95484 217 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 HNRNPA1P09651 372 aaKnown RBP eCLIP17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 CRHR1P34998 444 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 ASMTP46597 345 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 C9orf64Q5T6V5 341 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 SH3PXD2AQ5TCZ1 1133 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 EXOC3L1Q86VI1 746 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 CMTM8Q8IZV2 173 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 ZNF276Q8N554 614 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 FBXO30Q8TB52 745 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 RAB11FIP5Q9BXF6 653 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 SRMSQ9H3Y6 488 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 ZNF490Q9ULM2 529 aaPredicted RBP17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 CPTPQ5TA50 214 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 RNF19BQ6ZMZ0 732 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 MACC1Q6ZN28 852 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 RP9Q8TA86 221 aaKnown RBP17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 MARK4Q96L34 752 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 BTBD1Q9H0C5 482 aa17.59■□□□□ 0.41
CDC42EP3-201ENST00000295324 AP3D1O14617 1153 aa17.58■□□□□ 0.41
CDC42EP3-201ENST00000295324 KRT33AO76009 404 aa17.58■□□□□ 0.41
CDC42EP3-201ENST00000295324 PDE5AO76074 875 aa17.58■□□□□ 0.41
CDC42EP3-201ENST00000295324 CBX6O95503 412 aa17.58■□□□□ 0.41
CDC42EP3-201ENST00000295324 CCNFP41002 786 aa17.58■□□□□ 0.41
CDC42EP3-201ENST00000295324 ITPRIPL2Q3MIP1 535 aa17.58■□□□□ 0.41
CDC42EP3-201ENST00000295324 KIAA0930Q6ICG6 404 aaPredicted RBP17.58■□□□□ 0.41
CDC42EP3-201ENST00000295324 TRAF7Q6Q0C0 670 aa17.58■□□□□ 0.41
CDC42EP3-201ENST00000295324 SNX20Q7Z614 316 aa17.58■□□□□ 0.41
CDC42EP3-201ENST00000295324 OR52L1Q8NGH7 329 aa17.58■□□□□ 0.41
CDC42EP3-201ENST00000295324 OR6Y1Q8NGX8 325 aa17.58■□□□□ 0.41
CDC42EP3-201ENST00000295324 SMOQ99835 787 aa17.58■□□□□ 0.41
CDC42EP3-201ENST00000295324 INTS10Q9NVR2 710 aaKnown RBP17.58■□□□□ 0.41
CDC42EP3-201ENST00000295324 PSMD13Q9UNM6 376 aa17.58■□□□□ 0.41
CDC42EP3-201ENST00000295324 MFHAS1Q9Y4C4 1052 aa17.58■□□□□ 0.41
CDC42EP3-201ENST00000295324 MAGEA13PA6NCF6 341 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 CCL22O00626 93 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 LRATO95237 230 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 BPGMP07738 259 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 ACTR1BP42025 376 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 PKNOX1P55347 436 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 ACTR1AP61163 376 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 MPP1Q00013 466 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 CEP78Q5JTW2 689 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 MSANTD2Q6P1R3 559 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 ZNF280BQ86YH2 543 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 REXO5Q96IC2 774 aaKnown RBP17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 LMAN2LQ9H0V9 348 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 DOT1LQ8TEK3 1739 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 GABRDO14764 452 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 ZNF24P17028 368 aa17.58■□□□□ 0.4
CDC42EP3-201ENST00000295324 SERPINB1P30740 379 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms