RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 KLF1Q13351 362 aaPredicted RBP16.05■□□□□ 0.16
SSRP1-202ENST00000293880 RALGPS1Q5JS13 557 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 ESRP1Q6NXG1 681 aaKnown RBP16.05■□□□□ 0.16
SSRP1-202ENST00000293880 SMARCD3Q6STE5 483 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 ZNF410Q86VK4 478 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 TWIST2Q8WVJ9 160 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 LMAN2LQ9H0V9 348 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 IRF2BPLQ9H1B7 796 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 AGO1Q9UL18 857 aaKnown RBP16.05■□□□□ 0.16
SSRP1-202ENST00000293880 AP3M1Q9Y2T2 418 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 MDM4O15151 490 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 NKRFO15226 690 aaKnown RBP eCLIP16.05■□□□□ 0.16
SSRP1-202ENST00000293880 TFPIP10646 304 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 RAB2AP61019 212 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 HECTD2Q5U5R9 776 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 ANKRD46Q86W74 232 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 FATE1Q969F0 183 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 RNF31Q96EP0 1072 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 LRRC4CQ9HCJ2 640 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 INTS10Q9NVR2 710 aaKnown RBP16.05■□□□□ 0.16
SSRP1-202ENST00000293880 ASF1AQ9Y294 204 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 A0A1W2PQH9 124 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 NT5C1B-RDH14C9J2C7 533 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 BPGMP07738 259 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 SAGP10523 405 aaPredicted RBP16.05■□□□□ 0.16
SSRP1-202ENST00000293880 GPR158Q5T848 1215 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 SLC4A11Q8NBS3 891 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 RBM15BQ8NDT2 890 aaKnown RBP16.05■□□□□ 0.16
SSRP1-202ENST00000293880 FAM13CQ8NE31 585 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 TTKP33981 857 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 CCR10P46092 362 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 SLC30A6Q6NXT4 461 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 PIGZQ86VD9 579 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 ADCY4Q8NFM4 1077 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 DGCR14Q96DF8 476 aaKnown RBP16.05■□□□□ 0.16
SSRP1-202ENST00000293880 ACO2Q99798 780 aaKnown RBP16.05■□□□□ 0.16
SSRP1-202ENST00000293880 AASDHPPTQ9NRN7 309 aa16.05■□□□□ 0.16
SSRP1-202ENST00000293880 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.05■□□□□ 0.16
SSRP1-202ENST00000293880 TCRBV7S2A1N4TA0A589 114 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 CPTPQ5TA50 214 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 ANXA8L1Q5VT79 327 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 TNFRSF25Q93038 417 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 TBX5Q99593 518 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 TBC1D17Q9HA65 648 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 GPN1Q9HCN4 374 aaPredicted RBP16.04■□□□□ 0.16
SSRP1-202ENST00000293880 YARS2Q9Y2Z4 477 aaKnown RBP16.04■□□□□ 0.16
SSRP1-202ENST00000293880 SNX10Q9Y5X0 201 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 WTIPA6NIX2 430 aaPredicted RBP16.04■□□□□ 0.16
SSRP1-202ENST00000293880 CSH1P0DML2 217 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 CSH2P0DML3 217 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 SDC2P34741 201 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 AQP4P55087 323 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 FAM91A1Q658Y4 838 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 PLET1Q6UQ28 207 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 CRELD2Q6UXH1 353 aaPredicted RBP16.04■□□□□ 0.16
SSRP1-202ENST00000293880 EGFL6Q8IUX8 553 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 SORCS3Q9UPU3 1222 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 DCLK1O15075 740 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 SLC25A14O95258 325 aaPredicted RBP16.04■□□□□ 0.16
SSRP1-202ENST00000293880 UBA1P22314 1058 aaKnown RBP16.04■□□□□ 0.16
SSRP1-202ENST00000293880 OGFRL1Q5TC84 451 aaPredicted RBP16.04■□□□□ 0.16
SSRP1-202ENST00000293880 FRRS1Q6ZNA5 592 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 FAM35AQ86V20 835 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 SPERTQ8NA61 448 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 AZIN2Q96A70 460 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 SLC6A15Q9H2J7 730 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 MID1O15344 667 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 MAGEB3O15480 346 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 CHP2O43745 196 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 EDF1O60869 148 aaKnown RBP16.04■□□□□ 0.16
SSRP1-202ENST00000293880 FMO3P31513 532 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 SLC20A2Q08357 652 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 PLEKHG4Q58EX7 1191 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 HECTD3Q5T447 861 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 EXOSC8Q96B26 276 aaKnown RBP16.04■□□□□ 0.16
SSRP1-202ENST00000293880 CDCA5Q96FF9 252 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 APOLD1Q96LR9 279 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 HBEGFQ99075 208 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 PTPN18Q99952 460 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 FEM1AQ9BSK4 669 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 TTLL2Q9BWV7 592 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 RAPGEFL1Q9UHV5 662 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 GRIP1Q9Y3R0 1128 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 C9IYK1 514 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 RGS10O43665 173 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 PEX2P28328 305 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 GJA9P57773 515 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 CBX2Q14781 532 aaPredicted RBP16.04■□□□□ 0.16
SSRP1-202ENST00000293880 C4orf46Q504U0 113 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 LCN1P1Q5VSP4 162 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 KCTD8Q6ZWB6 473 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 FAM71AQ8IYT1 594 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 TRPV1Q8NER1 839 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 OR2T34Q8NGX1 318 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 OR2T3Q8NH03 318 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 RDH11Q8TC12 318 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 PMEPA1Q969W9 287 aa16.04■□□□□ 0.16
SSRP1-202ENST00000293880 TNFRSF11BO00300 401 aa16.03■□□□□ 0.16
SSRP1-202ENST00000293880 XYLBO75191 536 aa16.03■□□□□ 0.16
SSRP1-202ENST00000293880 SERPINB7O75635 380 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms