RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ASLP04424 464 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 TAF1AQ15573 450 aaPredicted RBP12.72□□□□□ -0.37
PTCD1-201ENST00000292478 GLYATQ6IB77 296 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 PIGWQ7Z7B1 504 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 NETO2Q8NC67 525 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 ZNF671Q8TAW3 534 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 SLC35B2Q8TB61 432 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 TBATAQ96M53 351 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 IFT80Q9P2H3 777 aaPredicted RBP12.72□□□□□ -0.37
PTCD1-201ENST00000292478 CNTN6Q9UQ52 1028 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 MRPS33Q9Y291 106 aaKnown RBP12.72□□□□□ -0.37
PTCD1-201ENST00000292478 NT5C1B-RDH14C9J2C7 533 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 OR10H3O60404 316 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 ZNF24P17028 368 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 CCR4P51679 360 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 LGALS3BPQ08380 585 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 KLHL35Q6PF15 583 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 KIAA1324Q6UXG2 1013 aaKnown RBP12.72□□□□□ -0.37
PTCD1-201ENST00000292478 DAW1Q8N136 415 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 NDRG1Q92597 394 aaKnown RBP12.72□□□□□ -0.37
PTCD1-201ENST00000292478 DGCR14Q96DF8 476 aaKnown RBP12.72□□□□□ -0.37
PTCD1-201ENST00000292478 FCRL5Q96RD9 977 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 CLIC5Q9NZA1 410 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 TULP3O75386 442 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 SEC24AO95486 1093 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 POP4O95707 220 aaKnown RBP12.72□□□□□ -0.37
PTCD1-201ENST00000292478 DNTTP04053 509 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 OR4Q2P0C623 313 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 PIK3C3Q8NEB9 887 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 MFSD3Q96ES6 412 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 HMCESQ96FZ2 354 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 VMP1Q96GC9 406 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 ZNF599Q96NL3 588 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 RBM4BQ9BQ04 359 aaKnown RBP12.72□□□□□ -0.37
PTCD1-201ENST00000292478 RBM4Q9BWF3 364 aaKnown RBP12.72□□□□□ -0.37
PTCD1-201ENST00000292478 TTLL2Q9BWV7 592 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 FBXL21Q9UKT6 434 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 Q9Y3F1 56 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 LOC100506127A0A0U1RQW1 187 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 H3BM21 787 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 TLL1O43897 1013 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 SCELO95171 688 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 IFNA16P05015 189 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 PRPS2P11908 318 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 MTAPQ13126 283 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 RINLQ6ZS11 566 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 CACUL1Q86Y37 369 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 ZHX1-C8orf76Q96EF9 292 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 SOHLH2Q9NX45 425 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 DTLQ9NZJ0 730 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 EHD3Q9NZN3 535 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 EGFL7Q9UHF1 273 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 ZFP37Q9Y6Q3 630 aaPredicted RBP12.72□□□□□ -0.37
PTCD1-201ENST00000292478 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.72□□□□□ -0.37
PTCD1-201ENST00000292478 CDH5P33151 784 aaPredicted RBP12.72□□□□□ -0.37
PTCD1-201ENST00000292478 MPP1Q00013 466 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 TRAP1Q12931 704 aaKnown RBP12.72□□□□□ -0.37
PTCD1-201ENST00000292478 MAPK11Q15759 364 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 PPM1JQ5JR12 505 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 RBM44Q6ZP01 1051 aaKnown RBP12.72□□□□□ -0.37
PTCD1-201ENST00000292478 CMASQ8NFW8 434 aaPredicted RBP12.72□□□□□ -0.37
PTCD1-201ENST00000292478 KCTD13Q8WZ19 329 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 EPB41L1Q9H4G0 881 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 ZDHHC18Q9NUE0 388 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 LYVE1Q9Y5Y7 322 aa12.72□□□□□ -0.37
PTCD1-201ENST00000292478 TMEM88BA6NKF7 163 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 GRIN2DO15399 1336 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 MANFP55145 182 aaKnown RBP12.71□□□□□ -0.37
PTCD1-201ENST00000292478 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.71□□□□□ -0.37
PTCD1-201ENST00000292478 CRYBG2Q8N1P7 616 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 FEM1CQ96JP0 617 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 IPPKQ9H8X2 491 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 ZNF624Q9P2J8 865 aaPredicted RBP12.71□□□□□ -0.37
PTCD1-201ENST00000292478 DEC1Q9P2X7 70 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 GTF2IRD1Q9UHL9 959 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 EVLQ9UI08 416 aaPredicted RBP12.71□□□□□ -0.37
PTCD1-201ENST00000292478 PRDM4Q9UKN5 801 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 H3BNX3 289 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 SLC28A2O43868 658 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 PGM3O95394 542 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 APODP05090 189 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 C8GP07360 202 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 NMBRP28336 390 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 SLC26A3P40879 764 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 EIF2B2P49770 351 aaKnown RBP12.71□□□□□ -0.37
PTCD1-201ENST00000292478 ROR2Q01974 943 aaKnown RBP12.71□□□□□ -0.37
PTCD1-201ENST00000292478 ZNF846Q147U1 533 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 NDUFAF6Q330K2 333 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 VARS2Q5ST30 1063 aaKnown RBP12.71□□□□□ -0.37
PTCD1-201ENST00000292478 REP15Q6BDI9 236 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 PYROXD2Q8N2H3 581 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 BTBD9Q96Q07 612 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 SQORQ9Y6N5 450 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 SNED1Q8TER0 1413 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 ELOVL7A1L3X0 281 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 SCAMP3O14828 347 aaKnown RBP12.71□□□□□ -0.37
PTCD1-201ENST00000292478 PRG2P13727 222 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 ITGADQ13349 1161 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 ZDHHC24Q6UX98 284 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 PHYKPLQ8IUZ5 450 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms