RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 SYVN1Q86TM6 617 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 MIER2Q8N344 545 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 ADCY4Q8NFM4 1077 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 SLCO4A1Q96BD0 722 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 HHIPL1Q96JK4 782 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 TCF12Q99081 682 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 ACOX2Q99424 681 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 ZNF225Q9UK10 706 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 K7ERQ8 282 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 PYGLP06737 847 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 ALPIP09923 528 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 ATP4BP51164 291 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 POLE2P56282 527 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 ATP6V0D1P61421 351 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 RHDQ02161 417 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 RBBP7Q16576 425 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 SAMD4BQ5PRF9 694 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 SPOUT1Q5T280 376 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 C8orf82Q6P1X6 216 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 CHST9Q7L1S5 443 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 ZNF461Q8TAF7 563 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 WFDC5Q8TCV5 224 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 CD200R1Q8TD46 325 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 EME1Q96AY2 570 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 CDK15Q96Q40 435 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 TM6SF2Q9BZW4 377 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 AFF4Q9UHB7 1163 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 YIPF1Q9Y548 306 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 SNX13Q9Y5W8 968 aa18.22■□□□□ 0.51
SHKBP1-201ENST00000291842 E5RI56 91 aa18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 PGM3O95394 542 aa18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 C8BP07358 591 aa18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 MBL2P11226 248 aaPredicted RBP18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 LBPP18428 481 aa18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 TTPAP49638 278 aa18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 APLP1P51693 650 aa18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 SMAD3P84022 425 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 GRM2Q14416 872 aa18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 MAP7D1Q3KQU3 841 aa18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 AMIGO2Q86SJ2 522 aa18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 HERC6Q8IVU3 1022 aa18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 NKAPQ8N5F7 415 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 AUTS2Q8WXX7 1259 aa18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 EID2BQ96D98 161 aa18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 IGSF21Q96ID5 467 aa18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 TRAPPC9Q96Q05 1148 aa18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 HGH1Q9BTY7 390 aa18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 MRPL40Q9NQ50 206 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 EIF2B4Q9UI10 523 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 APPL1Q9UKG1 709 aa18.21■□□□□ 0.51
SHKBP1-201ENST00000291842 GBF1Q92538 1859 aa18.21■□□□□ 0.5
SHKBP1-201ENST00000291842 MYOCOSA0A1B0GUC4 107 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 ZNF839A8K0R7 811 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 ANGPT2O15123 496 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 DENRO43583 198 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 RPS17P08708 135 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 SOX11P35716 441 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 RHOAP61586 193 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 C18orf21Q32NC0 220 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 FAM117BQ6P1L5 589 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 NCEH1Q6PIU2 408 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 TTC30BQ8N4P2 665 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 PCYOX1LQ8NBM8 494 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 OVCA2Q8WZ82 227 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 TEX37Q96LM6 180 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 CWH43Q9H720 699 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 CD274Q9NZQ7 290 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 LHX3Q9UBR4 397 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 EGFL7Q9UHF1 273 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 PCTPQ9UKL6 214 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 SYCE1LA8MT33 242 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 NME4O00746 187 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 ARL1P40616 181 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 GRIA3P42263 894 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 IL2P60568 153 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 ZXDBP98169 803 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 LIN52Q52LA3 116 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 NAIF1Q69YI7 327 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 DHFR2Q86XF0 187 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 SPDYE1Q8NFV5 336 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 VPS33AQ96AX1 596 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 C1orf50Q9BV19 199 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 PCDH10Q9P2E7 1040 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 BACE2Q9Y5Z0 518 aa18.2■□□□□ 0.5
SHKBP1-201ENST00000291842 PITPNM1O00562 1244 aa18.19■□□□□ 0.5
SHKBP1-201ENST00000291842 ITGB6P18564 788 aa18.19■□□□□ 0.5
SHKBP1-201ENST00000291842 ILF2Q12905 390 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-201ENST00000291842 LYSMD3Q7Z3D4 306 aa18.19■□□□□ 0.5
SHKBP1-201ENST00000291842 GPSM1Q86YR5 675 aa18.19■□□□□ 0.5
SHKBP1-201ENST00000291842 TMEM126BQ8IUX1 230 aa18.19■□□□□ 0.5
SHKBP1-201ENST00000291842 MARVELD2Q8N4S9 558 aa18.19■□□□□ 0.5
SHKBP1-201ENST00000291842 CATSPER1Q8NEC5 780 aa18.19■□□□□ 0.5
SHKBP1-201ENST00000291842 FEM1AQ9BSK4 669 aa18.19■□□□□ 0.5
SHKBP1-201ENST00000291842 COQ10BQ9H8M1 238 aa18.19■□□□□ 0.5
SHKBP1-201ENST00000291842 RAB26Q9ULW5 256 aa18.19■□□□□ 0.5
SHKBP1-201ENST00000291842 PRRG1O14668 218 aa18.19■□□□□ 0.5
SHKBP1-201ENST00000291842 SNX2O60749 519 aa18.19■□□□□ 0.5
SHKBP1-201ENST00000291842 EFEMP2O95967 443 aa18.19■□□□□ 0.5
SHKBP1-201ENST00000291842 SPATA31D3P0C874 917 aa18.19■□□□□ 0.5
SHKBP1-201ENST00000291842 ATP6V1B2P21281 511 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms