RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 FITM2Q8N6M3 262 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 TSSK3Q96PN8 268 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 SEMA3CQ99985 751 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 TRMOQ9BU70 441 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 IKZF2Q9UKS7 526 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 FAM149AA5PLN7 773 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 GTPBP1O00178 669 aaKnown RBP10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 MAGEB3O15480 346 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 MPSTP25325 297 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 CYP2C18P33260 490 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 PTGS2P35354 604 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 SLC5A3P53794 718 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 MAZP56270 477 aaKnown RBP10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 PPIL2Q13356 520 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 PTGES3Q15185 160 aaKnown RBP10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 ALG11Q2TAA5 492 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 PTPN20Q4JDL3 420 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 CBR4Q8N4T8 237 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 ZNF384Q8TF68 577 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 NSMCE3Q96MG7 304 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 ABCC13Q9NSE7 274 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 KANSL3Q9P2N6 904 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 CDH22Q9UJ99 828 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 BTNL10A8MVZ5 291 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 MCIDASD6RGH6 385 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 H0Y858 1186 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 FSCN2O14926 492 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 EPHB6O15197 1021 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 AIREO43918 545 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 MT-ND1P03886 318 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 SNAPC1Q16533 368 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 SLC39A12Q504Y0 691 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 CXorf57Q6NSI4 855 aaKnown RBP10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 KCNK18Q7Z418 384 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 ECHDC2Q86YB7 292 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 UBE2J2Q8N2K1 259 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 CPSF7Q8N684 471 aaKnown RBP10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 LRRN4Q8WUT4 740 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 TRAPPC12Q8WVT3 735 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 DNAJB3Q8WWF6 145 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 ZC3H10Q96K80 434 aaKnown RBP10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 FCRL4Q96PJ5 515 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 LGMNQ99538 433 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 RBM4BQ9BQ04 359 aaKnown RBP10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 SLC39A3Q9BRY0 314 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 RBM4Q9BWF3 364 aaKnown RBP10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 MGAT4AQ9UM21 535 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 TMEM98Q9Y2Y6 226 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 hCG_1818297A0A087WSY0 165 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 SLC30A4O14863 429 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 DHX15O43143 795 aaKnown RBP10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 UGT2B17O75795 530 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 KRT33AO76009 404 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 ECT2LQ008S8 904 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 GRIK4Q16099 956 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 MSANTD1Q6ZTZ1 278 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 PLEKHH3Q7Z736 793 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 RALGPS2Q86X27 583 aaPredicted RBP10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 DSELQ8IZU8 1212 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 PPCDCQ96CD2 204 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 AHCYL2Q96HN2 611 aaKnown RBP10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 CEP295NLQ96MC4 621 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 INPP4AQ96PE3 977 aaPredicted RBP10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 NODALQ96S42 347 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 VWA7Q9Y334 891 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 PEX16Q9Y5Y5 336 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 NFASCO94856 1347 aa10.69□□□□□ -0.7
PKNOX1-201ENST00000291547 PRAMEF33A0A0G2JMD5 474 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 TEX46H3BTG2 121 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 NFKBIEO00221 500 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 HCN1O60741 890 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 PRAMEF10O60809 474 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 TAL1P17542 331 aaPredicted RBP10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 RPS9P46781 194 aaKnown RBP10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 ARFIP1P53367 373 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 ARF3P61204 181 aaPredicted RBP10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 ARF1P84077 181 aaKnown RBP10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 MXD1Q05195 221 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 PGM5Q15124 567 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 SATL1Q86VE3 508 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 ATCAYQ86WG3 371 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 ZNF615Q8N8J6 731 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 CLHC1Q8NHS4 586 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 VANGL1Q8TAA9 524 aaPredicted RBP10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 GRIN3AQ8TCU5 1115 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 TM6SF2Q9BZW4 377 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 REXO2Q9Y3B8 237 aaKnown RBP10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 TJP1Q07157 1748 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 UBR2Q8IWV8 1755 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 C2orf71A6NGG8 1288 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 DCDC2CA8MYV0 355 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 RPLP2P05387 115 aaKnown RBP10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 THOP1P52888 689 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 MBTD1Q05BQ5 628 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 ZBTB6Q15916 424 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 KCTD19Q17RG1 926 aaPredicted RBP10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 RAP1GAP2Q684P5 730 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 FAM183BPQ6ZVS7 135 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 CYP2U1Q7Z449 544 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 NKX2-3Q8TAU0 364 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms