RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 ZDHHC12Q96GR4 267 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 VCPIP1Q96JH7 1222 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 SLCO5A1Q9H2Y9 848 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 TGFB1I1O43294 461 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 RSL1D1O76021 490 aaKnown RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 GCNT3O95395 438 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 AREGP15514 252 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 SLC6A2P23975 617 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 ACAT1P24752 427 aaKnown RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 NOS3P29474 1203 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 PPIFP30405 207 aaKnown RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 GATA4P43694 442 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 CASP9P55211 416 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 KIAA1024LP59773 190 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 ABRQ12979 859 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 TUBB2AQ13885 445 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 SQLEQ14534 574 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 RTP5Q14D33 572 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 NOMO2Q5JPE7 1267 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 RNASEH2BQ5TBB1 312 aaKnown RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 SLFN13Q68D06 897 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 SIGIRRQ6IA17 410 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 Q6ZNB5 142 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 INTS8Q75QN2 995 aaKnown RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 TAX1BP1Q86VP1 789 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 GUF1Q8N442 669 aaKnown RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 D2HGDHQ8N465 521 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 METTL25Q8N6Q8 603 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 OR56A1Q8NGH5 318 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 FBXO32Q969P5 355 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 ERO1AQ96HE7 468 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 MARK4Q96L34 752 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 TUBB2BQ9BVA1 445 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 ACTR8Q9H981 624 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 TUFT1Q9NNX1 390 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 FAM114A2Q9NRY5 505 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 RCOR1Q9UKL0 485 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 ZNF281Q9Y2X9 895 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 UBR2Q8IWV8 1755 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 A0A075B6Q4 140 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 PIPSLA2A3N6 862 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 A4D1N5 150 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 OLFM2O95897 454 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 CSF2RAP15509 400 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 CCT6AP40227 531 aaKnown RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 CETN2P41208 172 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 DIO1P49895 249 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 ANXA11P50995 505 aaKnown RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 JAK3P52333 1124 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 YPEL5P62699 121 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 SLC25A3Q00325 362 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 NEDD9Q14511 834 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 EIF4HQ15056 248 aaKnown RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 AKNAD1Q5T1N1 836 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 KLC3Q6P597 504 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 TMCO6Q96DC7 493 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 TMEM176AQ96HP8 235 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 CEP295NLQ96MC4 621 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 FYTTD1Q96QD9 318 aaKnown RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 TNFRSF12AQ9NP84 129 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 RPRD1BQ9NQG5 326 aaKnown RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 PRDM7Q9NQW5 492 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 HSPBP1Q9NZL4 362 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 UBQLN2Q9UHD9 624 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 SLCO3A1Q9UIG8 710 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 AMFRQ9UKV5 643 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 MED24O75448 989 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 TMCC1O94876 653 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 SLCO2B1O94956 709 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 C22orf31O95567 290 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 ATP6V1C1P21283 382 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 ACHEP22303 614 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 EPHB2P29323 1055 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 GCNT1Q02742 428 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 CAPSQ13938 189 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 EFTUD2Q15029 972 aaKnown RBP eCLIP2.75□□□□□ -1.971e-5■■■□□ 16.7
CHD1-201ENST00000284049 COL28A1Q2UY09 1125 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 USP41Q3LFD5 358 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 SLC39A12Q504Y0 691 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 ASPRV1Q53RT3 343 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 ANKRD16Q6P6B7 361 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 MEX3BQ6ZN04 569 aaKnown RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 UTS2BQ765I0 119 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 WDR5BQ86VZ2 330 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 CEP76Q8TAP6 659 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 ZNF398Q8TD17 642 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 FKBP10Q96AY3 582 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 MMABQ96EY8 250 aaPredicted RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 LCORQ96JN0 433 aaPredicted RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 PWWP2AQ96N64 755 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 RNF121Q9H920 327 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 SFXN1Q9H9B4 322 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 NMRK1Q9NWW6 199 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 FBXO40Q9UH90 709 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 SLC23A1Q9UHI7 598 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 SPACA6W5XKT8 324 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 A0A0A6YYK5 440 aaPredicted RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 C1orf226A1L170 272 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 OR2A25A4D2G3 310 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 CTIFO43310 598 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms