RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 SLC11A1P49279 550 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 C6orf52Q5T4I8 152 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 HMBOX1Q6NT76 420 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 ANKRD33Q7Z3H0 272 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 ABI1Q8IZP0 508 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 RYBPQ8N488 228 aaPredicted RBP24.89■■□□□ 1.57
ROM1-201ENST00000278833 OR4K2Q8NGD2 314 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 TRPC4APQ8TEL6 797 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 FUBP1Q96AE4 644 aaKnown RBP24.89■■□□□ 1.57
ROM1-201ENST00000278833 CNBD2Q96M20 576 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 NSMCE3Q96MG7 304 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 NSUN5Q96P11 429 aaKnown RBP24.89■■□□□ 1.57
ROM1-201ENST00000278833 HTATIP2Q9BUP3 242 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 BRINP2Q9C0B6 783 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 COQ10BQ9H8M1 238 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 PTTG2Q9NZH5 202 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 ZFP37Q9Y6Q3 630 aaPredicted RBP24.89■■□□□ 1.57
ROM1-201ENST00000278833 BPTFQ12830 3046 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 ALPK3Q96L96 1907 aa24.88■■□□□ 1.57
ROM1-201ENST00000278833 TYW5A2RUC4 315 aaKnown RBP24.88■■□□□ 1.57
ROM1-201ENST00000278833 NR5A2O00482 541 aa24.88■■□□□ 1.57
ROM1-201ENST00000278833 ANGPT2O15123 496 aa24.88■■□□□ 1.57
ROM1-201ENST00000278833 NDUFS3O75489 264 aa24.88■■□□□ 1.57
ROM1-201ENST00000278833 ALDH2P05091 517 aa24.88■■□□□ 1.57
ROM1-201ENST00000278833 LPOP22079 712 aaPredicted RBP24.88■■□□□ 1.57
ROM1-201ENST00000278833 RGRP47804 291 aa24.88■■□□□ 1.57
ROM1-201ENST00000278833 TTPAP49638 278 aa24.88■■□□□ 1.57
ROM1-201ENST00000278833 ATXN3P54252 364 aaPredicted RBP24.88■■□□□ 1.57
ROM1-201ENST00000278833 TLE2Q04725 743 aa24.88■■□□□ 1.57
ROM1-201ENST00000278833 GRB7Q14451 532 aa24.88■■□□□ 1.57
ROM1-201ENST00000278833 PPP4R4Q6NUP7 873 aa24.88■■□□□ 1.57
ROM1-201ENST00000278833 FAM126BQ8IXS8 530 aa24.88■■□□□ 1.57
ROM1-201ENST00000278833 CHCHD4Q8N4Q1 142 aa24.88■■□□□ 1.57
ROM1-201ENST00000278833 BIRC8Q96P09 236 aa24.88■■□□□ 1.57
ROM1-201ENST00000278833 SEZ6LQ9BYH1 1024 aa24.88■■□□□ 1.57
ROM1-201ENST00000278833 AIG1Q9NVV5 245 aa24.88■■□□□ 1.57
ROM1-201ENST00000278833 C7orf72A4D263 438 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 LRRC14BA6NHZ5 514 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 ESRRBO95718 433 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 UROSP10746 265 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 PKMP14618 531 aaKnown RBP24.87■■□□□ 1.57
ROM1-201ENST00000278833 ATP6V1B2P21281 511 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 RTP2Q5QGT7 225 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 INTS11Q5TA45 600 aaKnown RBP24.87■■□□□ 1.57
ROM1-201ENST00000278833 IL31Q6EBC2 164 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 ZNF783Q6ZMS7 281 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 SLC15A3Q8IY34 581 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 MDGA1Q8NFP4 955 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 SLC45A3Q96JT2 553 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 SCUBE2Q9NQ36 999 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 ACTR3BQ9P1U1 418 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 PCTPQ9UKL6 214 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 UBA6A0AVT1 1052 aaPredicted RBP24.87■■□□□ 1.57
ROM1-201ENST00000278833 PPP6CO00743 305 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 VPS26AO75436 327 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 TSPAN12O95859 305 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 PIRTP0C851 137 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 DUSP4Q13115 394 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 RCAN2Q14206 197 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 CYTH1Q15438 398 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 PDCD4Q53EL6 469 aaKnown RBP24.87■■□□□ 1.57
ROM1-201ENST00000278833 CFAP52Q8N1V2 620 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 GALNT4Q8N4A0 578 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 MFSD2AQ8NA29 543 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 TUBGCP3Q96CW5 907 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 IKZF3Q9UKT9 509 aa24.87■■□□□ 1.57
ROM1-201ENST00000278833 A0A1B0GVM2 712 aa24.86■■□□□ 1.57
ROM1-201ENST00000278833 HOXA2O43364 376 aa24.86■■□□□ 1.57
ROM1-201ENST00000278833 HNRNPRO43390 633 aaKnown RBP24.86■■□□□ 1.57
ROM1-201ENST00000278833 MT-CO1P00395 513 aa24.86■■□□□ 1.57
ROM1-201ENST00000278833 HGFP14210 728 aa24.86■■□□□ 1.57
ROM1-201ENST00000278833 FMO4P31512 558 aa24.86■■□□□ 1.57
ROM1-201ENST00000278833 ARPP19P56211 112 aa24.86■■□□□ 1.57
ROM1-201ENST00000278833 INPP5AQ14642 412 aa24.86■■□□□ 1.57
ROM1-201ENST00000278833 RBBP5Q15291 538 aaKnown RBP24.86■■□□□ 1.57
ROM1-201ENST00000278833 TSNQ15631 228 aaKnown RBP24.86■■□□□ 1.57
ROM1-201ENST00000278833 MTX3Q5HYI7 312 aa24.86■■□□□ 1.57
ROM1-201ENST00000278833 AARS2Q5JTZ9 985 aaKnown RBP24.86■■□□□ 1.57
ROM1-201ENST00000278833 LRRC8DQ7L1W4 858 aa24.86■■□□□ 1.57
ROM1-201ENST00000278833 PTRH1Q86Y79 214 aaKnown RBP24.86■■□□□ 1.57
ROM1-201ENST00000278833 DDIASQ8IXT1 998 aa24.86■■□□□ 1.57
ROM1-201ENST00000278833 KCNJ9Q92806 393 aa24.86■■□□□ 1.57
ROM1-201ENST00000278833 TOX2Q96NM4 488 aa24.86■■□□□ 1.57
ROM1-201ENST00000278833 GPR21Q99679 349 aa24.86■■□□□ 1.57
ROM1-201ENST00000278833 MRPL9Q9BYD2 267 aaKnown RBP24.86■■□□□ 1.57
ROM1-201ENST00000278833 ANKRD60Q9BZ19 345 aa24.86■■□□□ 1.57
ROM1-201ENST00000278833 AGO1Q9UL18 857 aaKnown RBP24.86■■□□□ 1.57
ROM1-201ENST00000278833 PCDHB7Q9Y5E2 793 aa24.86■■□□□ 1.57
ROM1-201ENST00000278833 PCDHA9Q9Y5H5 950 aa24.86■■□□□ 1.57
ROM1-201ENST00000278833 A0A1W2PP18 115 aa24.85■■□□□ 1.57
ROM1-201ENST00000278833 ENPP3O14638 875 aa24.85■■□□□ 1.57
ROM1-201ENST00000278833 PGM3O95394 542 aa24.85■■□□□ 1.57
ROM1-201ENST00000278833 C7P10643 843 aa24.85■■□□□ 1.57
ROM1-201ENST00000278833 SELPP16109 830 aa24.85■■□□□ 1.57
ROM1-201ENST00000278833 SLC6A2P23975 617 aa24.85■■□□□ 1.57
ROM1-201ENST00000278833 NR1H2P55055 460 aa24.85■■□□□ 1.57
ROM1-201ENST00000278833 GEN1Q17RS7 908 aa24.85■■□□□ 1.57
ROM1-201ENST00000278833 LAYNQ6UX15 382 aa24.85■■□□□ 1.57
ROM1-201ENST00000278833 LRRC58Q96CX6 371 aa24.85■■□□□ 1.57
ROM1-201ENST00000278833 B3GALT6Q96L58 329 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms