RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 MRPL28Q13084 256 aaKnown RBP9.17□□□□□ -0.94
PDGFC-201ENST00000274071 TRAF3Q13114 568 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 BAMBIQ13145 260 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 DGCR6Q14129 220 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 ZNF273Q14593 569 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 INPP5AQ14642 412 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 ACOX1Q15067 660 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 AANATQ16613 207 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 CTU2Q2VPK5 515 aaKnown RBP9.17□□□□□ -0.94
PDGFC-201ENST00000274071 USP17L2Q6R6M4 530 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 AQP12AQ8IXF9 295 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 CERS5Q8N5B7 392 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 OR8H1Q8NGG4 311 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 NCLNQ969V3 563 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 MAGEB10Q96LZ2 347 aaPredicted RBP9.17□□□□□ -0.94
PDGFC-201ENST00000274071 FOPNLQ96NB1 174 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 PPP1R2P1Q96PQ5 205 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 FAM49AQ9H0Q0 323 aaPredicted RBP9.17□□□□□ -0.94
PDGFC-201ENST00000274071 SPATA6Q9NWH7 488 aaPredicted RBP9.17□□□□□ -0.94
PDGFC-201ENST00000274071 RBAKQ9NYW8 714 aaPredicted RBP9.17□□□□□ -0.94
PDGFC-201ENST00000274071 EGFL7Q9UHF1 273 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 COPS3Q9UNS2 423 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 USP22Q9UPT9 525 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 E2F8A0AVK6 867 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 F8W036 122 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 NFIBO00712 420 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 SSX5O60225 188 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 GREM1O60565 184 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 FAM86B2P0C5J1 330 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 ITGB6P18564 788 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 DSG3P32926 999 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 RFC2P35250 354 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 NSFP46459 744 aaKnown RBP9.17□□□□□ -0.94
PDGFC-201ENST00000274071 GNPDA1P46926 289 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 MAPKAPK2P49137 400 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 RPL14P50914 215 aaKnown RBP9.17□□□□□ -0.94
PDGFC-201ENST00000274071 MYL6P60660 151 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 RPL7AP62424 266 aaKnown RBP9.17□□□□□ -0.94
PDGFC-201ENST00000274071 STX5Q13190 355 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 PICALMQ13492 652 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 ZNF484Q5JVG2 852 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 PIK3R6Q5UE93 754 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 REP15Q6BDI9 236 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 CES5AQ6NT32 575 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 TAF2Q6P1X5 1199 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 XKRXQ6PP77 449 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 MON1BQ7L1V2 547 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 BEND5Q7L4P6 421 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 NECAB2Q7Z6G3 386 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 C8orf59Q8N0T1 100 aaPredicted RBP9.17□□□□□ -0.94
PDGFC-201ENST00000274071 SEMA4DQ92854 862 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 FAM149B1Q96BN6 582 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 ELMO2Q96JJ3 720 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 RPL10LQ96L21 214 aaKnown RBP9.17□□□□□ -0.94
PDGFC-201ENST00000274071 OR2A14Q96R47 310 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 C11orf70Q9BRQ4 267 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 DCSTAMPQ9H295 470 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 CATSPERBQ9H7T0 1116 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 PRR12Q9ULL5 1215 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 MAPRE3Q9UPY8 281 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 ANKRD6Q9Y2G4 727 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 SLC15A5A6NIM6 579 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 HACD1B0YJ81 288 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 F8VP50 259 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 BTN3A1O00481 513 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 SYN3O14994 580 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 CST8O60676 142 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 LRCH4O75427 683 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 FTH1P02794 183 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 C2P06681 752 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 SELLP14151 372 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 CCR10P46092 362 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 ERVFC1P60507 584 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 RGS1Q08116 209 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 NFIAQ12857 509 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 LTB4RQ15722 352 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 AOC3Q16853 763 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 SETMARQ53H47 684 aaPredicted RBP9.16□□□□□ -0.94
PDGFC-201ENST00000274071 VARS2Q5ST30 1063 aaKnown RBP9.16□□□□□ -0.94
PDGFC-201ENST00000274071 RBM20Q5T481 1227 aaKnown RBP9.16□□□□□ -0.94
PDGFC-201ENST00000274071 TCTE3Q8IZS6 198 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 OR8H3Q8N146 312 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 GTF3C2Q8WUA4 911 aaPredicted RBP9.16□□□□□ -0.94
PDGFC-201ENST00000274071 FOXJ1Q92949 421 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 PTP4A1Q93096 173 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 SGK3Q96BR1 496 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 PTERQ96BW5 349 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 BCL2L14Q9BZR8 327 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 ZBTB20Q9HC78 741 aaPredicted RBP9.16□□□□□ -0.94
PDGFC-201ENST00000274071 INTS10Q9NVR2 710 aaKnown RBP9.16□□□□□ -0.94
PDGFC-201ENST00000274071 REV1Q9UBZ9 1251 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 ZNF639Q9UID6 485 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 CDYLQ9Y232 598 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 PRELID3BQ9Y3B1 194 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 PCDHGB1Q9Y5G3 927 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 ACTL7AQ9Y615 435 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 NRXN2Q9P2S2 1712 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 FER1L6Q2WGJ9 1857 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 A0A0U1RQS6 177 aa9.16□□□□□ -0.94
PDGFC-201ENST00000274071 ATP6AP2A0A1C7CYW4 349 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms