RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ATF7IP2Q5U623 682 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 ZCCHC8Q6NZY4 707 aaKnown RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 PIM3Q86V86 326 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 MFSD4AQ8N468 514 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 FKBP10Q96AY3 582 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 ZHX1-C8orf76Q96EF9 292 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 PSD2Q9BQI7 771 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 MRPL45Q9BRJ2 306 aaKnown RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 RNF167Q9H6Y7 350 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 PAK1IP1Q9NWT1 392 aaPredicted RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 ENPP5Q9UJA9 477 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 RABL2BQ9UNT1 228 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 FNDC3AQ9Y2H6 1198 aaKnown RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 CRYL1Q9Y2S2 319 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 STYXL1Q9Y6J8 313 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 SIPA1L1O43166 1804 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 UGT2B11O75310 529 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 RECQL5O94762 991 aaPredicted RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 CNTN5O94779 1100 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 PFKMP08237 780 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 MLNP12872 115 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 ATP5F1P24539 256 aaPredicted RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 CHRNA4P43681 627 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 SERPINB10P48595 397 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 ILF2Q12905 390 aaKnown RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 SURF1Q15526 300 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 AAK1Q2M2I8 961 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 GLYATQ6IB77 296 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 PIWIL4Q7Z3Z4 852 aaKnown RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 GALNT13Q8IUC8 556 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 ZDHHC13Q8IUH4 622 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 PEX5LQ8IYB4 626 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 DEFB106AQ8N104 65 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 PDPRQ8NCN5 879 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 KHSRPQ92945 711 aaKnown RBP eCLIP12.76□□□□□ -0.37
HERC6-202ENST00000273960 NSMCE2Q96MF7 247 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 ZNF641Q96N77 438 aaPredicted RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 NT5C1AQ9BXI3 368 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 RHOJQ9H4E5 214 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 GBA2Q9HCG7 927 aaPredicted RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 ZNF99A8MXY4 864 aaPredicted RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 EEF2KO00418 725 aaKnown RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 PPEF2O14830 753 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 MGEA5O60502 916 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 TOMM70O94826 608 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 PRKCAP17252 672 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 PROZP22891 400 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 AZGP1P25311 298 aaKnown RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 PTPN3P26045 913 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 KCNC1P48547 511 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 CYP4F2P78329 520 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 ADARB1P78563 741 aaKnown RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 EMX1Q04741 257 aaPredicted RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 CYP4F3Q08477 520 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 XRRA1Q6P2D8 792 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 SPRED1Q7Z699 444 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 LRRC49Q8IUZ0 686 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 PACRGLQ8N7B6 248 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 REPS2Q8NFH8 660 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 ZBTB20Q9HC78 741 aaPredicted RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 ACTR3BQ9P1U1 418 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 CPSF3Q9UKF6 684 aaKnown RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 MSCO60682 206 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 IL12AP29459 219 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 SLC1A2P43004 574 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 YWHAHQ04917 246 aaPredicted RBP12.75□□□□□ -0.37
HERC6-202ENST00000273960 TP53BP2Q13625 1128 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 FKBP9P1Q75LS8 142 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 STRADAQ7RTN6 431 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 P2RY8Q86VZ1 359 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 ELMOD2Q8IZ81 293 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 OR8H2Q8N162 312 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 BEND7Q8N7W2 519 aaPredicted RBP12.75□□□□□ -0.37
HERC6-202ENST00000273960 CHDHQ8NE62 594 aaPredicted RBP12.75□□□□□ -0.37
HERC6-202ENST00000273960 OR6P1Q8NGX9 317 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 SH3RF2Q8TEC5 729 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 AFG1LQ8WV93 481 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 PROX1Q92786 737 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 TOP1MTQ969P6 601 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 NCLNQ969V3 563 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 OMA1Q96E52 524 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 GPR22Q99680 433 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 CXCL16Q9H2A7 254 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 DSN1Q9H410 356 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 RIBC2Q9H4K1 309 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 SEMA4BQ9NPR2 832 aaPredicted RBP12.75□□□□□ -0.37
HERC6-202ENST00000273960 TLR9Q9NR96 1032 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 ZNF221Q9UK13 617 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 SNX6Q9UNH7 406 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 AQP12BA6NM10 295 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 M0QYT0 321 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 CRYZL1O95825 349 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 PRKACBP22694 351 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 ADCYAP1R1P41586 468 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 ATP6V0D1P61421 351 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 SKIV2LQ15477 1246 aaKnown RBP12.75□□□□□ -0.37
HERC6-202ENST00000273960 GPR158Q5T848 1215 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 AQP12AQ8IXF9 295 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 ATP6V0D2Q8N8Y2 350 aa12.75□□□□□ -0.37
HERC6-202ENST00000273960 ASCC1Q8N9N2 400 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms