RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 MYL3P08590 195 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 TCF3P15923 654 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 CRYBB1P53674 252 aaPredicted RBP27.32■■□□□ 1.96
CBX4-201ENST00000269397 RELAQ04206 551 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 SFSWAPQ12872 951 aaKnown RBP27.32■■□□□ 1.96
CBX4-201ENST00000269397 PIK3R6Q5UE93 754 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 GALNT18Q6P9A2 607 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 GOLM1Q8NBJ4 401 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 ADNPQ9H2P0 1102 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 UBA6A0AVT1 1052 aaPredicted RBP27.32■■□□□ 1.96
CBX4-201ENST00000269397 CCDC162PA2VCL2 907 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 ENPP3O14638 875 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 PAPSS2O95340 614 aaPredicted RBP27.32■■□□□ 1.96
CBX4-201ENST00000269397 PORP16435 677 aaPredicted RBP27.32■■□□□ 1.96
CBX4-201ENST00000269397 FUT4P22083 530 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 SLC26A3P40879 764 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 MLLT10P55197 1068 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 ADAM17P78536 824 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 BEX3Q00994 111 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 RCAN2Q14206 197 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 OR13F1Q8NGS4 319 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 OR10T2Q8NGX3 314 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 SNX19Q92543 992 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 ING2Q9H160 280 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 SH3BP1Q9Y3L3 701 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 MAGEA8P43361 318 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 LCP2Q13094 533 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 NR1D2Q14995 579 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 GRAMD4Q6IC98 578 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 SLC2A7Q6PXP3 512 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 PTRH1Q86Y79 214 aaKnown RBP27.31■■□□□ 1.96
CBX4-201ENST00000269397 FBXO39Q8N4B4 442 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 GLT1D1Q96MS3 346 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 SP110Q9HB58 689 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 RNF112Q9ULX5 631 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 SYNCRIPO60506 623 aaKnown RBP27.31■■□□□ 1.96
CBX4-201ENST00000269397 B3GAT3O94766 335 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 FAM163BP0C2L3 166 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 C7P10643 843 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 BFSP2Q13515 415 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 GALNT3Q14435 633 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 ALFQ53S48 1182 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 UGT3A1Q6NUS8 523 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 SCD5Q86SK9 330 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 PGBD5Q8N414 524 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 NPLOC4Q8TAT6 608 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 ASB2Q96Q27 587 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 ABCC13Q9NSE7 274 aa27.31■■□□□ 1.96
CBX4-201ENST00000269397 ARL5CA6NH57 179 aa27.3■■□□□ 1.96
CBX4-201ENST00000269397 IL12AP29459 219 aa27.3■■□□□ 1.96
CBX4-201ENST00000269397 TSNQ15631 228 aaKnown RBP27.3■■□□□ 1.96
CBX4-201ENST00000269397 MOGQ16653 247 aa27.3■■□□□ 1.96
CBX4-201ENST00000269397 PAQR3Q6TCH7 311 aa27.3■■□□□ 1.96
CBX4-201ENST00000269397 PDZD8Q8NEN9 1154 aa27.3■■□□□ 1.96
CBX4-201ENST00000269397 LHPPQ9H008 270 aa27.3■■□□□ 1.96
CBX4-201ENST00000269397 NTN4Q9HB63 628 aa27.3■■□□□ 1.96
CBX4-201ENST00000269397 INIPQ9NRY2 104 aa27.3■■□□□ 1.96
CBX4-201ENST00000269397 OSER1Q9NX31 292 aa27.3■■□□□ 1.96
CBX4-201ENST00000269397 ATXN1LP0C7T5 689 aaKnown RBP27.3■■□□□ 1.96
CBX4-201ENST00000269397 IL7RP16871 459 aa27.3■■□□□ 1.96
CBX4-201ENST00000269397 YWHAHQ04917 246 aaPredicted RBP27.3■■□□□ 1.96
CBX4-201ENST00000269397 PIGFQ07326 219 aa27.3■■□□□ 1.96
CBX4-201ENST00000269397 FOXM1Q08050 763 aa27.3■■□□□ 1.96
CBX4-201ENST00000269397 IQSEC1Q6DN90 963 aa27.3■■□□□ 1.96
CBX4-201ENST00000269397 GPR142Q7Z601 462 aa27.3■■□□□ 1.96
CBX4-201ENST00000269397 OR2T11Q8NH01 316 aa27.3■■□□□ 1.96
CBX4-201ENST00000269397 CSF3RQ99062 836 aa27.3■■□□□ 1.96
CBX4-201ENST00000269397 SLC22A3O75751 556 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 ITGADQ13349 1161 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 SDHAF4Q5VUM1 108 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 ZNF773Q6PK81 442 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 COLGALT2Q8IYK4 626 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 PPM1MQ96MI6 270 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 SMOC2Q9H3U7 446 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 ADARB2Q9NS39 739 aaKnown RBP27.29■■□□□ 1.96
CBX4-201ENST00000269397 FAM105AQ9NUU6 356 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 AIG1Q9NVV5 245 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP27.29■■□□□ 1.962e-6■■□□□ 12.6
CBX4-201ENST00000269397 PCDHGA11Q9Y5H2 935 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 CDC7O00311 574 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 PDHXO00330 501 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 BCL10O95999 233 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 POMCP01189 267 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 POLR2JP52435 117 aaKnown RBP27.29■■□□□ 1.96
CBX4-201ENST00000269397 IST1P53990 364 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 GLYATQ6IB77 296 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 SYVN1Q86TM6 617 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 RNF168Q8IYW5 571 aaPredicted RBP27.29■■□□□ 1.96
CBX4-201ENST00000269397 CLEC4FQ8N1N0 589 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 PAPD5Q8NDF8 572 aaKnown RBP27.29■■□□□ 1.96
CBX4-201ENST00000269397 ERLEC1Q96DZ1 483 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 HBEGFQ99075 208 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 BDH2Q9BUT1 245 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 ZNF225Q9UK10 706 aa27.29■■□□□ 1.96
CBX4-201ENST00000269397 A0A1W2PQH9 124 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 TNPO2O14787 897 aaKnown RBP27.28■■□□□ 1.96
CBX4-201ENST00000269397 MBL2P11226 248 aaPredicted RBP27.28■■□□□ 1.96
CBX4-201ENST00000269397 GRIK1P39086 918 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 PSEN2P49810 448 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 MLLT6P55198 1093 aaPredicted RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms