RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 SIX3O95343 332 aaPredicted RBP16.49■□□□□ 0.23
CCDC40-201ENST00000269318 CHRM3P20309 590 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 PGM1P36871 562 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 MNAT1P51948 309 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 RAP1GDS1P52306 607 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 SATB1Q01826 763 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 BTKQ06187 659 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 GPM6BQ13491 265 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 PFKFB4Q16877 469 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 C9orf50Q5SZB4 431 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 TPRG1Q6ZUI0 275 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 Q6ZVU0 165 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 PLPP6Q8IY26 295 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 CHST14Q8NCH0 376 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 OR2A12Q8NGT7 310 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 EEF1AKMT1Q8WVE0 214 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 SLC2A11Q9BYW1 496 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 ZDHHC6Q9H6R6 413 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 ASB8Q9H765 288 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 MEAF6Q9HAF1 191 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 RNF112Q9ULX5 631 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 GLYATL1P3A0A0U1RQE8 302 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 CCDC189A1A4V9 331 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 NPEPPSL1A6NEC2 478 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 MEI4A8MW99 385 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 A8MX80 341 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 SLC9A3R1O14745 358 aaPredicted RBP16.49■□□□□ 0.23
CCDC40-201ENST00000269318 SLC22A2O15244 555 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 KLK8O60259 260 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 PEX11AO75192 247 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 PAPLNO95428 1278 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 ITGALP20701 1170 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 LHCGRP22888 699 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 ACRV1P26436 265 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 SPAM1P38567 509 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 INHBCP55103 352 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 IL2P60568 153 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 ERVK-21P61565 698 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 TMEM198Q66K66 360 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 GRAMD4Q6IC98 578 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 USP45Q70EL2 814 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 CPNE9Q8IYJ1 553 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 AHI1Q8N157 1196 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 MYLIPQ8WY64 445 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 LINGO1Q96FE5 620 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 MRGPRX3Q96LB0 322 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 LBHD1Q9BQE6 289 aaPredicted RBP16.49■□□□□ 0.23
CCDC40-201ENST00000269318 BOCQ9BWV1 1114 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 FBXO10Q9UK96 956 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 ERVW-1Q9UQF0 538 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 DHRS7Q9Y394 339 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 TRAF6Q9Y4K3 522 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 LRRC14BA6NHZ5 514 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 AGAP14A8MT82 685 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 E5RI56 91 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 BTN3A1O00481 513 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 UGT2B4P06133 528 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 COX4I1P13073 169 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 GFAPP14136 432 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 CD1EP15812 388 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 ZNF7P17097 686 aaPredicted RBP16.48■□□□□ 0.23
CCDC40-201ENST00000269318 TSPAN8P19075 237 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 CCND1P24385 295 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 PTPN5P54829 565 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 CDH13P55290 713 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 SEMG2Q02383 582 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 CHRNA6Q15825 494 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 GEN1Q17RS7 908 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 LRRC66Q68CR7 880 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 UGT3A1Q6NUS8 523 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 RAB44Q7Z6P3 723 aaPredicted RBP16.48■□□□□ 0.23
CCDC40-201ENST00000269318 KIRREL3Q8IZU9 778 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 RBFAQ8N0V3 343 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 ARHGAP24Q8N264 748 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 CELF5Q8N6W0 485 aaKnown RBP16.48■□□□□ 0.23
CCDC40-201ENST00000269318 NAT16Q8N8M0 369 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 GPR26Q8NDV2 337 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 FRS2Q8WU20 508 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 SAMD11Q96NU1 681 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 LENG8Q96PV6 779 aaPredicted RBP16.48■□□□□ 0.23
CCDC40-201ENST00000269318 ASB2Q96Q27 587 aa16.48■□□□□ 0.23
CCDC40-201ENST00000269318 SYCE1LA8MT33 242 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 SUPT3HB4E1H0 165 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 ENTPD5O75356 428 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 SUPT3HO75486 399 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 SKAP2O75563 359 aaPredicted RBP16.47■□□□□ 0.23
CCDC40-201ENST00000269318 TM7SF2O76062 418 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 CHRM1P11229 460 aaPredicted RBP16.47■□□□□ 0.23
CCDC40-201ENST00000269318 UGT1A6P19224 532 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 UGT1A1P22309 533 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 UGT1A4P22310 534 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 PIK3R1P27986 724 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 WEE1P30291 646 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 ADSLP30566 484 aaPredicted RBP16.47■□□□□ 0.23
CCDC40-201ENST00000269318 UGT1A3P35503 534 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 UGT1A5P35504 534 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 PPARGP37231 505 aaPredicted RBP16.47■□□□□ 0.23
CCDC40-201ENST00000269318 SH3BP2P78314 561 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 PTSQ03393 145 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 DHCR24Q15392 516 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms