RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 IQCF5A8MTL0 148 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 UPK3BL1B0FP48 263 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 UPK3BL2E5RIL1 263 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 MYO1CO00159 1063 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 IPO13O94829 963 aaKnown RBP11.47□□□□□ -0.57
SCAF11-201ENST00000266589 HLA-EP13747 358 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 ZNF30P17039 623 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 XPAP23025 273 aaPredicted RBP11.47□□□□□ -0.57
SCAF11-201ENST00000266589 MPSTP25325 297 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 VIPR1P32241 457 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 GJA4P35212 333 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 SPINT3P49223 89 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 OR4D1Q15615 310 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 ARL13AQ5H913 290 aaPredicted RBP11.47□□□□□ -0.57
SCAF11-201ENST00000266589 CFAP157Q5JU67 520 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 PTRHD1Q6GMV3 140 aaKnown RBP11.47□□□□□ -0.57
SCAF11-201ENST00000266589 PARM1Q6UWI2 310 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 MAVSQ7Z434 540 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 CLNKQ7Z7G1 428 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 TTC7BQ86TV6 843 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 ALYREFQ86V81 257 aaKnown RBP11.47□□□□□ -0.57
SCAF11-201ENST00000266589 NXPE1Q8N323 547 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 NKAPQ8N5F7 415 aaKnown RBP11.47□□□□□ -0.57
SCAF11-201ENST00000266589 GIMAP7Q8NHV1 300 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 NAT14Q8WUY8 206 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 FGF14Q92915 247 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 ELSPBP1Q96BH3 223 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 PHF21BQ96EK2 531 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 PLEKHG4BQ96PX9 1271 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 ILKAPQ9H0C8 392 aaPredicted RBP11.47□□□□□ -0.57
SCAF11-201ENST00000266589 CDH19Q9H159 772 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 ZNF576Q9H609 170 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 SARS2Q9NP81 518 aaKnown RBP11.47□□□□□ -0.57
SCAF11-201ENST00000266589 PCDH12Q9NPG4 1184 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 PKD2L2Q9NZM6 624 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 GNPTGQ9UJJ9 305 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 TCF20Q9UGU0 1960 aaKnown RBP11.47□□□□□ -0.57
SCAF11-201ENST00000266589 TBC1D3BA6NDS4 549 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 NPHS1O60500 1241 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 FSBPO95073 299 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 LAMP2P13473 410 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 TIMP2P16035 220 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 RPS3P23396 243 aaKnown RBP eCLIP11.47□□□□□ -0.57
SCAF11-201ENST00000266589 NFKBIAP25963 317 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 SKIV2L2P42285 1042 aaKnown RBP11.47□□□□□ -0.57
SCAF11-201ENST00000266589 ATP6V0D1P61421 351 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 ZNF234Q14588 700 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 ZDHHC20Q5W0Z9 365 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 UGT3A1Q6NUS8 523 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 PIWIL4Q7Z3Z4 852 aaKnown RBP11.47□□□□□ -0.57
SCAF11-201ENST00000266589 SLC22A9Q8IVM8 553 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 KDM1BQ8NB78 822 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 RHEBL1Q8TAI7 183 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 RIPOR3Q96MK2 946 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 RILPQ96NA2 401 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 TFB2MQ9H5Q4 396 aaKnown RBP11.47□□□□□ -0.57
SCAF11-201ENST00000266589 CLDND1Q9NY35 253 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 DKK3Q9UBP4 350 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 CD84Q9UIB8 345 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 PRDM4Q9UKN5 801 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 RAP2CQ9Y3L5 183 aa11.47□□□□□ -0.57
SCAF11-201ENST00000266589 EDDM13A0A1B0GTR0 161 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 C16orf96A6NNT2 1141 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 AGAP14A8MT82 685 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 KPNA3O00505 521 aaPredicted RBP11.46□□□□□ -0.57
SCAF11-201ENST00000266589 SMIM24O75264 130 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 ALOX15P16050 662 aaPredicted RBP11.46□□□□□ -0.57
SCAF11-201ENST00000266589 GDI1P31150 447 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 CLCN7P51798 805 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 IL2P60568 153 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 PRKAA1Q13131 559 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 HNRNPA1L2Q32P51 320 aaKnown RBP11.46□□□□□ -0.57
SCAF11-201ENST00000266589 ATP13A5Q4VNC0 1218 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 C9orf64Q5T6V5 341 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 SERPINA13PQ6UXR4 307 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 PARS2Q7L3T8 475 aaKnown RBP11.46□□□□□ -0.57
SCAF11-201ENST00000266589 HSD11B1LQ7Z5J1 315 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 CPNE9Q8IYJ1 553 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 LSMEM2Q8N112 164 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 CLDN19Q8N6F1 224 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 HCAR2Q8TDS4 363 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 KIAA1191Q96A73 305 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 LINGO1Q96FE5 620 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 PRR11Q96HE9 360 aaPredicted RBP11.46□□□□□ -0.57
SCAF11-201ENST00000266589 ATOH8Q96SQ7 321 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 SHCBP1LQ9BZQ2 653 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 NMUR2Q9GZQ4 415 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 STN1Q9H668 368 aaKnown RBP11.46□□□□□ -0.57
SCAF11-201ENST00000266589 DNAJC28Q9NX36 388 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 IKZF3Q9UKT9 509 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 SARDHQ9UL12 918 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 PRSS21Q9Y6M0 314 aa11.46□□□□□ -0.57
SCAF11-201ENST00000266589 PLXNA2O75051 1894 aa11.46□□□□□ -0.58
SCAF11-201ENST00000266589 UBXN8O00124 270 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 BTN3A1O00481 513 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 FCHO1O14526 889 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 ZNF195O14628 629 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 KERAO60938 352 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 TSPAN12O95859 305 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 PRNPP04156 253 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms