RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 MCOLN3Q8TDD5 553 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 MED8Q96G25 268 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 ACOX2Q99424 681 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 RERGLQ9H628 205 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 BLOC1S4Q9NUP1 217 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 KANSL3Q9P2N6 904 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 DOCK3Q8IZD9 2030 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 KPNA5O15131 536 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 ALOX15BO15296 676 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 SLC22A3O75751 556 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 THP07101 528 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 PSMB4P28070 264 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 OR1E1P30953 314 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 EARS2Q5JPH6 523 aaKnown RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 HIPK1Q86Z02 1210 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 NKX2-3Q8TAU0 364 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 SHC3Q92529 594 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 METTL2AQ96IZ6 378 aaKnown RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 POLR1EQ9GZS1 481 aaKnown RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 ZNF334Q9HCZ1 680 aaPredicted RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 APOC1P02654 83 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 RPN2P04844 631 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 HMGN1P05114 100 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 DSG3P32926 999 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 CRHR1P34998 444 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 RPL22P35268 128 aaKnown RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 HNMTP50135 292 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 CDH15P55291 814 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 RAB10P61026 200 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 FAM131AQ6UXB0 335 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 PTAR1Q7Z6K3 402 aaPredicted RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 MAP4K3Q8IVH8 894 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 SLC44A2Q8IWA5 706 aaPredicted RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 DENND6BQ8NEG7 585 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 ART5Q96L15 291 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 CHST7Q9NS84 486 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 DNAJC28Q9NX36 388 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 GRHL1Q9NZI5 618 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 RAB23Q9ULC3 237 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 A0A087WZ62 844 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 TRUB2O95900 331 aaKnown RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 ATXN8OSP0DMR3 200 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 MAPKAPK3Q16644 382 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 FAM76BQ5HYJ3 339 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 FAM92BQ6ZTR7 304 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 CXXC5Q7LFL8 322 aaKnown RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 TMEM86AQ8N2M4 240 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 SLC38A2Q96QD8 506 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 ACE2Q9BYF1 805 aaPredicted RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 ALG9Q9H6U8 611 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 ACTR10Q9NZ32 417 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 PLA2G4CQ9UP65 541 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 TCRBV9S1A1TA0A576 114 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 OR14I1A6ND48 311 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 MDM4O15151 490 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 CABYRO75952 493 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 PRMT2P55345 433 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 TBX4P57082 545 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 INHBEP58166 350 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 RFPL4BQ6ZWI9 263 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 ADGRG6Q86SQ4 1221 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 HPS6Q86YV9 775 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 PURBQ96QR8 312 aaKnown RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 PSD2Q9BQI7 771 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 FAM126AQ9BYI3 521 aaPredicted RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 DDX43Q9NXZ2 648 aaKnown RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 CARNS1A5YM72 827 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 IFRD1O00458 451 aaPredicted RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 FSCN2O14926 492 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 SLC22A2O15244 555 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 MBL2P11226 248 aaPredicted RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 RPS3P23396 243 aaKnown RBP eCLIP5.67□□□□□ -1.5
VCAN-201ENST00000265077 SSTP61278 116 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 PGM5Q15124 567 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 PSMD5Q16401 504 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 CHMP1BQ7LBR1 199 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 TDRPQ86YL5 185 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 EFCAB3Q8N7B9 438 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 OR52K1Q8NGK4 314 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 HSFY1Q96LI6 401 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 SPATA5L1Q9BVQ7 753 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 MYO7BQ6PIF6 2116 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 ZMPSTE24O75844 475 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 ALX3O95076 343 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 COL6A2P12110 1019 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 RPL17P18621 184 aaKnown RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 DGKQP52824 942 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 NAGLUP54802 743 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 BACE1P56817 501 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 PRKG2Q13237 762 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 PGBD2Q6P3X8 592 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 R3HCC1LQ7Z5L2 792 aaKnown RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 SLC44A1Q8WWI5 657 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 MRPS31Q92665 395 aaKnown RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 SNX18Q96RF0 628 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 NODALQ96S42 347 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 RBM4BQ9BQ04 359 aaKnown RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 RBM4Q9BWF3 364 aaKnown RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 ELOVL4Q9GZR5 314 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms