RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 EBF4Q9BQW3 602 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 DRC3Q9H069 523 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 OXSMQ9NWU1 459 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 CORO1CQ9ULV4 474 aaPredicted RBP9.26□□□□□ -0.93
SSR3-201ENST00000265044 RPL26L1Q9UNX3 145 aaKnown RBP9.26□□□□□ -0.93
SSR3-201ENST00000265044 ZNF638Q14966 1978 aaKnown RBP9.25□□□□□ -0.93
SSR3-201ENST00000265044 ZMPSTE24O75844 475 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 CDK14O94921 469 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 SIX3O95343 332 aaPredicted RBP9.25□□□□□ -0.93
SSR3-201ENST00000265044 BAG2O95816 211 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 CHRM1P11229 460 aaPredicted RBP9.25□□□□□ -0.93
SSR3-201ENST00000265044 ARNTP27540 789 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 EEF1DP29692 281 aaKnown RBP9.25□□□□□ -0.93
SSR3-201ENST00000265044 CCR10P46092 362 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 CRY1Q16526 586 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 C5orf22Q49AR2 442 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 YTHDF3Q7Z739 585 aaKnown RBP9.25□□□□□ -0.93
SSR3-201ENST00000265044 LCA5Q86VQ0 697 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 PIP4K2CQ8TBX8 421 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 CMTM5Q96DZ9 223 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 ABHD8Q96I13 439 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 SLC2A11Q9BYW1 496 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 IL17CQ9P0M4 197 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 ZNF212Q9UDV6 495 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 TMEM114B3SHH9 223 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 WASH3PC4AMC7 463 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 TGDSO95455 350 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 ENO3P13929 434 aaPredicted RBP9.25□□□□□ -0.93
SSR3-201ENST00000265044 PSMC3P17980 439 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 SLC6A11P48066 632 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 SGCGQ13326 291 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 RUNX3Q13761 415 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 UBAP2LQ14157 1087 aaKnown RBP9.25□□□□□ -0.93
SSR3-201ENST00000265044 LYPLAL1Q5VWZ2 237 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 TANGO2Q6ICL3 276 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 CLNKQ7Z7G1 428 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 ZNF641Q96N77 438 aaPredicted RBP9.25□□□□□ -0.93
SSR3-201ENST00000265044 SUN2Q9UH99 717 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 NUMA1Q14980 2115 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 MROH6A6NGR9 719 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 NPIPB15A6NHN6 443 aaPredicted RBP9.25□□□□□ -0.93
SSR3-201ENST00000265044 H3BQ06 376 aaPredicted RBP9.25□□□□□ -0.93
SSR3-201ENST00000265044 RNASEH2AO75792 299 aaKnown RBP9.25□□□□□ -0.93
SSR3-201ENST00000265044 ACADMP11310 421 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 FGF3P11487 239 aaPredicted RBP9.25□□□□□ -0.93
SSR3-201ENST00000265044 NSG1P42857 185 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 NFATC2Q13469 925 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 BIRC2Q13490 618 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 TCEA2Q15560 299 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 GALNTL6Q49A17 601 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 FAM46CQ5VWP2 391 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 SCIMPQ6UWF3 145 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 RGS9BPQ6ZS82 235 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 ADAMTSL2Q86TH1 951 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 FAM124AQ86V42 546 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 SP7Q8TDD2 431 aaPredicted RBP9.25□□□□□ -0.93
SSR3-201ENST00000265044 EEF1AKMT1Q8WVE0 214 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 ANKRD49Q8WVL7 239 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 C10orf82Q8WW14 230 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 SH3KBP1Q96B97 665 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 SCRN2Q96FV2 425 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 ACOX2Q99424 681 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 CDH19Q9H159 772 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 OSGEPL1Q9H4B0 414 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 CDH7Q9ULB5 785 aa9.25□□□□□ -0.93
SSR3-201ENST00000265044 C16orf96A6NNT2 1141 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 UPK3BL1B0FP48 263 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 UPK3BL2E5RIL1 263 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 CDC7O00311 574 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 PRLP01236 227 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 BPIP17213 487 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 CR2P20023 1033 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 CALB2P22676 271 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 COPAP53621 1224 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 E2F5Q15329 346 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 SNCBQ16143 134 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 CLEC6AQ6EIG7 209 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 LAYNQ6UX15 382 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 CUZD1Q86UP6 607 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 KIRREL3Q8IZU9 778 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 CEP70Q8NHQ1 597 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 METTL6Q8TCB7 284 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 FAR2Q96K12 515 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 TUBGCP5Q96RT8 1024 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 RIOK2Q9BVS4 552 aaKnown RBP9.24□□□□□ -0.93
SSR3-201ENST00000265044 SLC40A1Q9NP59 571 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 GDE1Q9NZC3 331 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.24□□□□□ -0.93
SSR3-201ENST00000265044 CAPN8A6NHC0 703 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 A8MT66 165 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 KAT7O95251 611 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 DHRS4L1P0CG22 281 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 ZNF37AP17032 561 aaPredicted RBP9.24□□□□□ -0.93
SSR3-201ENST00000265044 ABRQ12979 859 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 MSLNQ13421 630 aaPredicted RBP9.24□□□□□ -0.93
SSR3-201ENST00000265044 DDX39BQ13838 428 aaKnown RBP9.24□□□□□ -0.93
SSR3-201ENST00000265044 ZNF77Q15935 545 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 GPR33Q49SQ1 333 aa9.24□□□□□ -0.93
SSR3-201ENST00000265044 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.24□□□□□ -0.93
SSR3-201ENST00000265044 CENPLQ8N0S6 344 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms