RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ZNF613Q6PF04 617 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 TSEN15Q8WW01 171 aaKnown RBP17.9■□□□□ 0.46
COL5A3-201ENST00000264828 SLC44A1Q8WWI5 657 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 LRTOMTQ8WZ04 291 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 KCTD15Q96SI1 283 aaPredicted RBP17.9■□□□□ 0.46
COL5A3-201ENST00000264828 LRTM1Q9HBL6 345 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 ST3GAL5Q9UNP4 418 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 MYO5BQ9ULV0 1848 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 PLSCR1O15162 318 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 CDH5P33151 784 aaPredicted RBP17.9■□□□□ 0.46
COL5A3-201ENST00000264828 IKBKEQ14164 716 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 FASTKD3Q14CZ7 662 aaKnown RBP17.9■□□□□ 0.46
COL5A3-201ENST00000264828 GALNTL5Q7Z4T8 443 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 IL31RAQ8NI17 732 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 COPS8Q99627 209 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 RHOJQ9H4E5 214 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 AASDHPPTQ9NRN7 309 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 HOXC6P09630 235 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 CLUP10909 449 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 SDC2P34741 201 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 YAP1P46937 504 aaKnown RBP17.9■□□□□ 0.46
COL5A3-201ENST00000264828 GMFBP60983 142 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 NOMO2Q5JPE7 1267 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 C9orf64Q5T6V5 341 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 RAB43Q86YS6 212 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 NAT14Q8WUY8 206 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 INPP4AQ96PE3 977 aaPredicted RBP17.9■□□□□ 0.46
COL5A3-201ENST00000264828 RBM4BQ9BQ04 359 aaKnown RBP17.9■□□□□ 0.46
COL5A3-201ENST00000264828 RBM4Q9BWF3 364 aaKnown RBP17.9■□□□□ 0.46
COL5A3-201ENST00000264828 SP140LQ9H930 580 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 AGO3Q9H9G7 860 aaKnown RBP17.9■□□□□ 0.46
COL5A3-201ENST00000264828 GPN1Q9HCN4 374 aaPredicted RBP17.9■□□□□ 0.46
COL5A3-201ENST00000264828 ZNF224Q9NZL3 707 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 A0A1W2PQH9 124 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 MAGEB3O15480 346 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 ELFN1P0C7U0 828 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 FAUP35544 74 aaKnown RBP17.9■□□□□ 0.46
COL5A3-201ENST00000264828 SSR2P43308 183 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 PSMD5Q16401 504 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 SNAP47Q5SQN1 464 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 ZNF662Q6ZS27 426 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 DUSP16Q9BY84 665 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 SEC14L3Q9UDX4 400 aa17.9■□□□□ 0.46
COL5A3-201ENST00000264828 SLIT3O75094 1523 aa17.89■□□□□ 0.46
COL5A3-201ENST00000264828 C2P06681 752 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 SAGP10523 405 aaPredicted RBP17.89■□□□□ 0.45
COL5A3-201ENST00000264828 ENPEPQ07075 957 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 CERS5Q8N5B7 392 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 GFM1Q96RP9 751 aaKnown RBP17.89■□□□□ 0.45
COL5A3-201ENST00000264828 GPER1Q99527 375 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 ALG2Q9H553 416 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 EXD2Q9NVH0 621 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 AKAP7Q9P0M2 348 aaPredicted RBP17.89■□□□□ 0.45
COL5A3-201ENST00000264828 SUCOQ9UBS9 1254 aaKnown RBP17.89■□□□□ 0.45
COL5A3-201ENST00000264828 IFT172Q9UG01 1749 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 MFSD11O43934 449 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 METTL18O95568 372 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 NCK1P16333 377 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 ZNF132P52740 706 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 RHBDL3P58872 404 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 STXBP1P61764 594 aaKnown RBP17.89■□□□□ 0.45
COL5A3-201ENST00000264828 MPP1Q00013 466 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 ZBTB6Q15916 424 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 SWI5Q1ZZU3 235 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 PLET1Q6UQ28 207 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 A0A075B6Q4 140 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 TCRBV7S2A1N4TA0A589 114 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 DPPA5A6NC42 116 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 TNFRSF11BO00300 401 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 TM7SF2O76062 418 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 SPATA31D3P0C874 917 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 CBFBQ13951 182 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 SPATA31D4Q6ZUB0 917 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 KAT2AQ92830 837 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 ZNF558Q96NG5 402 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 CHCHD6Q9BRQ6 235 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 BRINP2Q9C0B6 783 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 TMLHEQ9NVH6 421 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 A0A0X1KG70 313 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 IPO13O94829 963 aaKnown RBP17.89■□□□□ 0.45
COL5A3-201ENST00000264828 IFNA6P05013 189 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 PPIBP23284 216 aaKnown RBP17.89■□□□□ 0.45
COL5A3-201ENST00000264828 OLR1P78380 273 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 ATG10Q9H0Y0 220 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 C11orf16Q9NQ32 467 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 RAB26Q9ULW5 256 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 SNX7Q9UNH6 387 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 RPL26L1Q9UNX3 145 aaKnown RBP17.89■□□□□ 0.45
COL5A3-201ENST00000264828 CYP3A7-CYP3A51PA0A087WV96 503 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 TGDSO95455 350 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 CYP3A7P24462 503 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 CCNYL2Q5T2Q4 361 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 TMPRSS11AQ6ZMR5 421 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 CCDC80Q76M96 950 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 MKL1Q969V6 931 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 GLOD4Q9HC38 313 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 UBIAD1Q9Y5Z9 338 aa17.89■□□□□ 0.45
COL5A3-201ENST00000264828 UBR1Q8IWV7 1749 aa17.88■□□□□ 0.45
COL5A3-201ENST00000264828 QSOX1O00391 747 aa17.88■□□□□ 0.45
COL5A3-201ENST00000264828 RPP40O75818 363 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms