RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 CARD9Q9H257 536 aa15.92■□□□□ 0.14
USE1-201ENST00000263897 TRIM39Q9HCM9 518 aa15.92■□□□□ 0.14
USE1-201ENST00000263897 ATXN10Q9UBB4 475 aa15.92■□□□□ 0.14
USE1-201ENST00000263897 ATRXP46100 2492 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 TRBV23OR9-2A0A075B6M9 112 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 H7C0C1 242 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 GRID2O43424 1007 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 RBL1P28749 1068 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 CD1CP29017 333 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 PTPN7P35236 360 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 HMGCLP35914 325 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 ATP5OP48047 213 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 RWDD2BP57060 319 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 SQSTM1Q13501 440 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 NOMO1Q15155 1222 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 CLPPQ16740 277 aaPredicted RBP15.91■□□□□ 0.14
USE1-201ENST00000263897 SIRPB2Q5JXA9 342 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 ZNF648Q5T619 568 aaPredicted RBP15.91■□□□□ 0.14
USE1-201ENST00000263897 CCDC181Q5TID7 509 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 PDPK2PQ6A1A2 396 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 TMEM139Q8IV31 216 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 SLITRK4Q8IW52 837 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 SFRP1Q8N474 314 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 LRRC57Q8N9N7 239 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 ACTL9Q8TC94 416 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 GLYATL1Q969I3 302 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 TMEM159Q96B96 161 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 OR2AG1Q9H205 316 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 SEMA6CQ9H3T2 930 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 TRABDQ9H4I3 376 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 C10orf88Q9H8K7 445 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 RDH14Q9HBH5 336 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 ARFGAP3Q9NP61 516 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 IMPACTQ9P2X3 320 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 SSUH2Q9Y2M2 353 aa15.91■□□□□ 0.14
USE1-201ENST00000263897 GRID2IPA4D2P6 1211 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 F5H423 210 aaPredicted RBP15.9■□□□□ 0.14
USE1-201ENST00000263897 EML2O95834 649 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 SLC4A1P02730 911 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 HGFP14210 728 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 ZNF8P17098 575 aaPredicted RBP15.9■□□□□ 0.14
USE1-201ENST00000263897 CETN2P41208 172 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 TNNT3P45378 269 aaPredicted RBP15.9■□□□□ 0.14
USE1-201ENST00000263897 FASLGP48023 281 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 OTUD4Q01804 1114 aaKnown RBP15.9■□□□□ 0.14
USE1-201ENST00000263897 MPP3Q13368 585 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 SLC1A5Q15758 541 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 SOWAHCQ53LP3 525 aaPredicted RBP15.9■□□□□ 0.14
USE1-201ENST00000263897 ZNF569Q5MCW4 686 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 IYDQ6PHW0 289 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 ZNF574Q6ZN55 896 aaPredicted RBP15.9■□□□□ 0.14
USE1-201ENST00000263897 ADGRG6Q86SQ4 1221 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 KIAA1328Q86T90 577 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 TTC30BQ8N4P2 665 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 SLC25A41Q8N5S1 370 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 SLC37A2Q8TED4 501 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 ALG3Q92685 438 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 CCDC97Q96F63 343 aaPredicted RBP15.9■□□□□ 0.14
USE1-201ENST00000263897 PLEKHG4BQ96PX9 1271 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 BPIFA1Q9NP55 256 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 TBC1D29Q9UFV1 150 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 LOXL2Q9Y4K0 774 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 PCDHGA7Q9Y5G6 932 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 ADGRG1Q9Y653 693 aa15.9■□□□□ 0.14
USE1-201ENST00000263897 SCN8AQ9UQD0 1980 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 IGHV1OR21-1A0A087WYE8 117 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 GPR89AB7ZAQ6 455 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 CHUKO15111 745 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 KLK10O43240 276 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 JMJD7P0C870 316 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 GPR89BP0CG08 455 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 PYGMP11217 842 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 ACP5P13686 325 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 HOXB3P14651 431 aaPredicted RBP15.89■□□□□ 0.13
USE1-201ENST00000263897 CDC25BP30305 580 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 SLC5A2P31639 672 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 CHRNA4P43681 627 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 CLCNKAP51800 687 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 MAP9Q49MG5 647 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.89■□□□□ 0.13
USE1-201ENST00000263897 PHF19Q5T6S3 580 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 BROXQ5VW32 411 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 IPMKQ8NFU5 416 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 DTX3LQ8TDB6 740 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 FCRL3Q96P31 734 aaPredicted RBP15.89■□□□□ 0.13
USE1-201ENST00000263897 CMKLR1Q99788 373 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 FERMT1Q9BQL6 677 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 NUDT22Q9BRQ3 303 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 IL26Q9NPH9 171 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 KCNK4Q9NYG8 393 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 HACD3Q9P035 362 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 IL17CQ9P0M4 197 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 RSPH14Q9UHP6 348 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 AMFRQ9UKV5 643 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 TMPRSS11EQ9UL52 423 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 KCNK6Q9Y257 313 aa15.89■□□□□ 0.13
USE1-201ENST00000263897 IGHV5-10-1A0A0J9YXX1 117 aa15.88■□□□□ 0.13
USE1-201ENST00000263897 A6NCN8 305 aa15.88■□□□□ 0.13
USE1-201ENST00000263897 NVLO15381 856 aaKnown RBP15.88■□□□□ 0.13
USE1-201ENST00000263897 VEGFDO43915 354 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms