RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 OR2AT4A6NND4 320 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 SCAMP1O15126 338 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 APOL3O95236 402 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 FSHRP23945 695 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 PEX6Q13608 980 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.8□□□□□ -0.36
TTC39A-202ENST00000262676 DNAJA4Q8WW22 397 aaPredicted RBP12.8□□□□□ -0.36
TTC39A-202ENST00000262676 KAT2AQ92830 837 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 ACE2Q9BYF1 805 aaPredicted RBP12.8□□□□□ -0.36
TTC39A-202ENST00000262676 ULBP1Q9BZM6 244 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 POLR1EQ9GZS1 481 aaKnown RBP12.8□□□□□ -0.36
TTC39A-202ENST00000262676 NXF3Q9H4D5 531 aaKnown RBP12.8□□□□□ -0.36
TTC39A-202ENST00000262676 MROH2AA6NES4 1674 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 ZNF536O15090 1300 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 IRGMA1A4Y4 181 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 PIAS1O75925 651 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 CFIP05156 583 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 MIPP30301 263 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 GNALP38405 381 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 VEGFBP49765 207 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 SNAPC1Q16533 368 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 RAET1GQ6H3X3 334 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 WDR59Q6PJI9 974 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 CHRDL2Q6WN34 429 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 SPPL2CQ8IUH8 684 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 C10orf107Q8IVU9 208 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 SYNPOQ8N3V7 929 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 UBE2E3Q969T4 207 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 FAM163AQ96GL9 167 aaPredicted RBP12.8□□□□□ -0.36
TTC39A-202ENST00000262676 TEFMQ96QE5 360 aaKnown RBP12.8□□□□□ -0.36
TTC39A-202ENST00000262676 TTLL2Q9BWV7 592 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 UNC93B1Q9H1C4 597 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 PRELID1Q9Y255 219 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 ACTL7BQ9Y614 415 aa12.8□□□□□ -0.36
TTC39A-202ENST00000262676 BAZ2BQ9UIF8 2168 aaKnown RBP12.79□□□□□ -0.36
TTC39A-202ENST00000262676 A8MUI8 341 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 DUSP11O75319 330 aaKnown RBP12.79□□□□□ -0.36
TTC39A-202ENST00000262676 CCNE2O96020 404 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 RPL19P84098 196 aaKnown RBP12.79□□□□□ -0.36
TTC39A-202ENST00000262676 PARP6Q2NL67 630 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 TOR1AIP1Q5JTV8 583 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 PCID2Q5JVF3 399 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 LINGO2Q7L985 606 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 PSTKQ8IV42 348 aaKnown RBP12.79□□□□□ -0.36
TTC39A-202ENST00000262676 GSTCDQ8NEC7 633 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 MECRQ9BV79 373 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 KCNN2Q9H2S1 579 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 TRIM64A6NGJ6 449 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 CLDN5O00501 218 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 CHST10O43529 356 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 CXCR2P25025 360 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 ARPC4P59998 168 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 TXNL4AP83876 142 aaKnown RBP12.79□□□□□ -0.36
TTC39A-202ENST00000262676 SP140Q13342 867 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 CRY2Q49AN0 593 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 ATP13A4Q4VNC1 1196 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 GK5Q6ZS86 529 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 DGLUCYQ7Z3D6 616 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 CIR1Q86X95 450 aaPredicted RBP12.79□□□□□ -0.36
TTC39A-202ENST00000262676 C17orf50Q8WW18 174 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 ZNF606Q8WXB4 792 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 MCMBPQ9BTE3 642 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 TTPALQ9BTX7 342 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 TMCO1Q9UM00 188 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 CARNS1A5YM72 827 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 C5orf51A6NDU8 294 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 GJA1P17302 382 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 ACTR3P61158 418 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 TSPAN5P62079 268 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 SV2AQ7L0J3 742 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 CHST15Q7LFX5 561 aaPredicted RBP12.79□□□□□ -0.36
TTC39A-202ENST00000262676 GPR180Q86V85 440 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 NRSN1Q8IZ57 195 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 NKAPQ8N5F7 415 aaKnown RBP12.79□□□□□ -0.36
TTC39A-202ENST00000262676 OR10G6Q8NH81 332 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 BAP1Q92560 729 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 RIPOR3Q96MK2 946 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 KLHL5Q96PQ7 755 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 RGS17Q9UGC6 210 aaPredicted RBP12.79□□□□□ -0.36
TTC39A-202ENST00000262676 ABCG2Q9UNQ0 655 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 SMPD1P17405 629 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 TUBB3Q13509 450 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 SIM2Q14190 667 aaPredicted RBP12.79□□□□□ -0.36
TTC39A-202ENST00000262676 PITRM1Q5JRX3 1037 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 SERPINB11Q96P15 392 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.79□□□□□ -0.36
TTC39A-202ENST00000262676 BCKDKO14874 412 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 TSPAN1O60635 241 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 GATBO75879 557 aaKnown RBP12.79□□□□□ -0.36
TTC39A-202ENST00000262676 POLR2LP62875 67 aaKnown RBP12.79□□□□□ -0.36
TTC39A-202ENST00000262676 OLR1P78380 273 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 SMAD3P84022 425 aaKnown RBP12.79□□□□□ -0.36
TTC39A-202ENST00000262676 CWF19L1Q69YN2 538 aaKnown RBP12.79□□□□□ -0.36
TTC39A-202ENST00000262676 LRRC69Q6ZNQ3 347 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 DBF4BQ8NFT6 615 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 AUTS2Q8WXX7 1259 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 CCDC177Q9NQR7 707 aaPredicted RBP12.79□□□□□ -0.36
TTC39A-202ENST00000262676 SRRDQ9UH36 339 aa12.79□□□□□ -0.36
TTC39A-202ENST00000262676 FAM86C2PA6NEL3 165 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 SERPINA6P08185 405 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms