RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 POU6F1Q14863 301 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 INO80DQ53TQ3 878 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 FAM69BQ5VUD6 431 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 LCN10Q6JVE6 187 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 TPGS1Q6ZTW0 290 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 KIAA2013Q8IYS2 634 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 KRT222Q8N1A0 295 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 EEF1AKMT1Q8WVE0 214 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 IFT43Q96FT9 208 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 ZNF560Q96MR9 790 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 IKBKGQ9Y6K9 419 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 C2P06681 752 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 KCNJ2P63252 427 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 TBL3Q12788 808 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 BFSP2Q13515 415 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 HSP90AA5PQ58FG0 334 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 FOXB2Q5VYV0 432 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 OR9I1Q8NGQ6 314 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 TMEM51Q9NW97 253 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 WDR35Q9P2L0 1181 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 MRPS2Q9Y399 296 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 TERTO14746 1132 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 TPP1O14773 563 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 EDF1O60869 148 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 TADA2AO75478 443 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 CDK14O94921 469 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 GBP1P32455 592 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 CTHP32929 405 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 HK2P52789 917 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 PFKPQ01813 784 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 IL10RBQ08334 325 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 ESPL1Q14674 2120 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 TLR1Q15399 786 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 KIAA1614Q5VZ46 1190 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 EMBQ6PCB8 327 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 ADGRG6Q86SQ4 1221 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 RSPH3Q86UC2 560 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 PDSS2Q86YH6 399 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 C10orf107Q8IVU9 208 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 FBXL6Q8N531 539 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 IPO4Q8TEX9 1081 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 ATP6V1G3Q96LB4 118 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 FCRL4Q96PJ5 515 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 NUDCD1Q96RS6 583 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 SEMA3CQ99985 751 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 CORO1BQ9BR76 489 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 TM6SF2Q9BZW4 377 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 ZDHHC5Q9C0B5 715 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 MUC3BQ9H195 1237 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 NLE1Q9NVX2 485 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 FKBPLQ9UIM3 349 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 CAPN8A6NHC0 703 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 GDF5P43026 501 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 STC1P52823 247 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 TBX4P57082 545 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 ERVPABLB-1P60509 514 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 SF3A3Q12874 501 aaKnown RBP eCLIP5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 DENND2CQ68D51 928 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 Q6ZVL8 140 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 PDZD4Q76G19 769 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 DET1Q7L5Y6 550 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 NSMCE1Q8WV22 266 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 FMO2Q99518 471 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 ZYG11BQ9C0D3 744 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 BPIFA1Q9NP55 256 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 NFKBIL1Q9UBC1 381 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 ZNF180Q9UJW8 692 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 PTBP2Q9UKA9 531 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 FAM237BA0A1B0GVD1 139 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 SLC12A8A0AV02 714 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 RPLP2P05387 115 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 CES1P23141 567 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 CSNK1DP48730 415 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 LIMK2P53671 638 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 LIN9Q5TKA1 542 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 PAQR3Q6TCH7 311 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 DSTYKQ6XUX3 929 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 ZNF771Q7L3S4 317 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 LGI2Q8N0V4 545 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 ZNF558Q96NG5 402 aa5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 CACYBPQ9HB71 228 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 THAP10Q9P2Z0 257 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-201ENST00000260810 GOLGA8QA0A0J9YX86 632 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 GOLGA8OA6NCC3 632 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 FAM187AA6NFU0 413 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 GOLGA8NF8WBI6 632 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 PHGDHO43175 533 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 LCMT2O60294 686 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 SPAG7O75391 227 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 CCNHP51946 323 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 BRD3Q15059 726 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 KYAT1Q16773 422 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 ACSBG2Q5FVE4 666 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 EFHC1Q5JVL4 640 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 PEAR1Q5VY43 1037 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 DLEU7Q6UYE1 221 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 ZBED8Q8IZ13 594 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 PABPC5Q96DU9 382 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 SNF8Q96H20 258 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms