RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 KCTD15Q96SI1 283 aaPredicted RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 OSGEPL1Q9H4B0 414 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 PLK2Q9NYY3 685 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 SPATA7Q9P0W8 599 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 OAZ3Q9UMX2 235 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 SNX6Q9UNH7 406 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 RBM47A0AV96 593 aaKnown RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 MDM4O15151 490 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 MID1O15344 667 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 MTA2O94776 668 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 TMEM63AO94886 807 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 HLA-DQA2P01906 255 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 RPLP0P05388 317 aaKnown RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 AP2S1P53680 142 aaPredicted RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 PTP4A2Q12974 167 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 CELF3Q5SZQ8 465 aaKnown RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 METTL21CQ5VZV1 264 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 LDB1Q86U70 411 aaPredicted RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 PYROXD2Q8N2H3 581 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 TTC29Q8NA56 475 aaPredicted RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 VANGL1Q8TAA9 524 aaPredicted RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 EXOC2Q96KP1 924 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 COLEC11Q9BWP8 271 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 RHOJQ9H4E5 214 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 APOBEC3GQ9HC16 384 aaKnown RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 PLK4O00444 970 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 TRIM3O75382 744 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 IPO13O94829 963 aaKnown RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 F7P08709 466 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 COL6A1P12109 1028 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 ABL2P42684 1182 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 MTAPQ13126 283 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 GRM3Q14832 879 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZNF829Q3KNS6 432 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 SH3PXD2AQ5TCZ1 1133 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 HMBOX1Q6NT76 420 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 RNASE11Q8TAA1 199 aaKnown RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 TMEM159Q96B96 161 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 GATA5Q9BWX5 397 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 SSU72Q9NP77 194 aaKnown RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 AHSPQ9NZD4 102 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 ANGPT4Q9Y264 503 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 NPEPPSL1A6NEC2 478 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 SGTAO43765 313 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 ORC5O43913 435 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 GPIP06744 558 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZNF182P17025 639 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZNF157P51786 506 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 MPP1Q00013 466 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZYG11AQ6WRX3 759 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 PLEKHH3Q7Z736 793 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 RASAL3Q86YV0 1011 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 LEMD2Q8NC56 503 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 RAET1EQ8TD07 263 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZNF384Q8TF68 577 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 SHISA4Q96DD7 197 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 TSSK3Q96PN8 268 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 HBEGFQ99075 208 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 ELOVL4Q9GZR5 314 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 FBXO44Q9H4M3 255 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 TRPM5Q9NZQ8 1165 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 COMMD3Q9UBI1 195 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 DNAJB4Q9UDY4 337 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 SAMD4AQ9UPU9 718 aaKnown RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 VWA7Q9Y334 891 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 PCDHA2Q9Y5H9 948 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 NFASCO94856 1347 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 ISPDA4D126 451 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 SLC28A1O00337 649 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 YES1P07947 543 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 TGFBR2P37173 567 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 DCDC1P59894 354 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 HSPA14Q0VDF9 509 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 USP43Q70EL4 1123 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 MTSS1LQ765P7 747 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 C7orf57Q8NEG2 295 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 OR52L1Q8NGH7 329 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 SEMA3CQ99985 751 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 DMAC2Q9NW81 257 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 ABCG2Q9UNQ0 655 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 CLPXO76031 633 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 UNGP13051 313 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 TPSB2P20231 275 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 PPP2R2BQ00005 443 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 TPSAB1Q15661 275 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 INSCQ1MX18 579 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 TRIM40Q6P9F5 258 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 CNSTQ6PJW8 725 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 TEX47Q8TBZ9 253 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 CANT1Q8WVQ1 401 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 AGAP2Q99490 1192 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 FNDC11Q9BVV2 318 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 NLNQ9BYT8 704 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 MIR1-1HGQ9H1L0 117 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 ABCC13Q9NSE7 274 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 IGLV3-22A0A075B6J6 115 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZBTB14O43829 449 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 CLIC3O95833 236 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 FABP3P05413 133 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 CFHP08603 1231 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms