RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 BPIP17213 487 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 NOVA1P51513 510 aaKnown RBP16.65■□□□□ 0.26
SDCBP-201ENST00000260130 HK3P52790 923 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 SRP54P61011 504 aaKnown RBP16.65■□□□□ 0.26
SDCBP-201ENST00000260130 MSLNQ13421 630 aaPredicted RBP16.65■□□□□ 0.26
SDCBP-201ENST00000260130 ALG11Q2TAA5 492 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 TTC27Q6P3X3 843 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 LINC00523Q86TU6 105 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 HID1Q8IV36 788 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 BRSK1Q8TDC3 778 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 SLC13A1Q9BZW2 595 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 IL17CQ9P0M4 197 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 APOBEC3BQ9UH17 382 aaKnown RBP16.65■□□□□ 0.26
SDCBP-201ENST00000260130 RASGRP1O95267 797 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 COILP38432 576 aaPredicted RBP16.65■□□□□ 0.26
SDCBP-201ENST00000260130 EIF3BP55884 814 aaKnown RBP16.65■□□□□ 0.26
SDCBP-201ENST00000260130 SEMA5AQ13591 1074 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 PSAPL1Q6NUJ1 521 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 RD3Q7Z3Z2 195 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 RBFAQ8N0V3 343 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 OR2W6PQ8NHA6 318 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 HIC2Q96JB3 615 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 SPATA16Q9BXB7 569 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 TCEAL2Q9H3H9 227 aaPredicted RBP16.65■□□□□ 0.26
SDCBP-201ENST00000260130 FGF22Q9HCT0 170 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 SPASTQ9UBP0 616 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 NEMP2A6NFY4 417 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 C2orf81A6NN90 581 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 PPP2R2AP63151 447 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 DHX9Q08211 1270 aaKnown RBP16.64■□□□□ 0.25
SDCBP-201ENST00000260130 TAF1AQ15573 450 aaPredicted RBP16.64■□□□□ 0.25
SDCBP-201ENST00000260130 ZDHHC20Q5W0Z9 365 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 CCDC137Q6PK04 289 aaKnown RBP16.64■□□□□ 0.25
SDCBP-201ENST00000260130 EID2Q8N6I1 236 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 ZNF548Q8NEK5 533 aaPredicted RBP16.64■□□□□ 0.25
SDCBP-201ENST00000260130 OR1E3Q8WZA6 343 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 PLEKHG4BQ96PX9 1271 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 ZSCAN5AQ9BUG6 496 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 PKP3Q9Y446 797 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 ARL5AQ9Y689 179 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 DGKBQ9Y6T7 804 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 TP53BP1Q12888 1972 aaPredicted RBP16.64■□□□□ 0.25
SDCBP-201ENST00000260130 GMNCA6NCL1 334 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 FAM187AA6NFU0 413 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 FADS2P1A8MWK0 482 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 GIPC1O14908 333 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 INPP4BO15327 924 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 AQP9O43315 295 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 BUD23O43709 281 aaKnown RBP16.64■□□□□ 0.25
SDCBP-201ENST00000260130 PHF2O75151 1096 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 PPFIA2O75334 1257 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 SUN1O94901 812 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 TNFP01375 233 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 CEACAM5P06731 702 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 SEC24CP53992 1094 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 TRIP6Q15654 476 aaKnown RBP16.64■□□□□ 0.25
SDCBP-201ENST00000260130 PRRT3Q5FWE3 981 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 PPM1JQ5JR12 505 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 CNPY4Q8N129 248 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 TRAM1L1Q8N609 369 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 BAHD1Q8TBE0 780 aaPredicted RBP16.64■□□□□ 0.25
SDCBP-201ENST00000260130 LMX1AQ8TE12 382 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 PDXPQ96GD0 296 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 COX14Q96I36 57 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 TBATAQ96M53 351 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 FMO2Q99518 471 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 CDC6Q99741 560 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 FRMD8Q9BZ67 464 aaPredicted RBP16.64■□□□□ 0.25
SDCBP-201ENST00000260130 MRPL40Q9NQ50 206 aaKnown RBP16.64■□□□□ 0.25
SDCBP-201ENST00000260130 PPANQ9NQ55 473 aaKnown RBP16.64■□□□□ 0.25
SDCBP-201ENST00000260130 MOSPD1Q9UJG1 213 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 CNOT6Q9ULM6 557 aaKnown RBP16.64■□□□□ 0.25
SDCBP-201ENST00000260130 CSNK1G3Q9Y6M4 447 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 CAPN7Q9Y6W3 813 aa16.64■□□□□ 0.25
SDCBP-201ENST00000260130 H0YHG0 523 aa16.63■□□□□ 0.25
SDCBP-201ENST00000260130 SCAMP1O15126 338 aa16.63■□□□□ 0.25
SDCBP-201ENST00000260130 STX7O15400 261 aaKnown RBP16.63■□□□□ 0.25
SDCBP-201ENST00000260130 CRTAMO95727 393 aa16.63■□□□□ 0.25
SDCBP-201ENST00000260130 APRTP07741 180 aa16.63■□□□□ 0.25
SDCBP-201ENST00000260130 TPH1P17752 444 aa16.63■□□□□ 0.25
SDCBP-201ENST00000260130 LPOP22079 712 aaPredicted RBP16.63■□□□□ 0.25
SDCBP-201ENST00000260130 PDE1BQ01064 536 aa16.63■□□□□ 0.25
SDCBP-201ENST00000260130 DHX34Q14147 1143 aaKnown RBP16.63■□□□□ 0.25
SDCBP-201ENST00000260130 DPH5Q9H2P9 285 aa16.63■□□□□ 0.25
SDCBP-201ENST00000260130 CYP4F12Q9HCS2 524 aa16.63■□□□□ 0.25
SDCBP-201ENST00000260130 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.63■□□□□ 0.251e-6■■■□□ 17.3
SDCBP-201ENST00000260130 SLC17A4Q9Y2C5 497 aa16.63■□□□□ 0.25
SDCBP-201ENST00000260130 PRSS38A1L453 326 aa16.62■□□□□ 0.25
SDCBP-201ENST00000260130 CTSEP14091 401 aa16.62■□□□□ 0.25
SDCBP-201ENST00000260130 KCNA4P22459 653 aa16.62■□□□□ 0.25
SDCBP-201ENST00000260130 FNTAP49354 379 aa16.62■□□□□ 0.25
SDCBP-201ENST00000260130 DR1Q01658 176 aa16.62■□□□□ 0.25
SDCBP-201ENST00000260130 IFFO1Q0D2I5 559 aa16.62■□□□□ 0.25
SDCBP-201ENST00000260130 C1orf61Q13536 156 aa16.62■□□□□ 0.25
SDCBP-201ENST00000260130 PDPK2PQ6A1A2 396 aa16.62■□□□□ 0.25
SDCBP-201ENST00000260130 LRRC61Q9BV99 259 aa16.62■□□□□ 0.25
SDCBP-201ENST00000260130 IL26Q9NPH9 171 aa16.62■□□□□ 0.25
SDCBP-201ENST00000260130 TMEM98Q9Y2Y6 226 aa16.62■□□□□ 0.25
SDCBP-201ENST00000260130 FFAR2O15552 330 aa16.62■□□□□ 0.25
SDCBP-201ENST00000260130 GIMD1P0DJR0 217 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms