RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 AGBL3Q8NEM8 1001 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 SNX33Q8WV41 574 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 GPRASP2Q96D09 838 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 RNF170Q96K19 258 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 DACH2Q96NX9 599 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 OR1F2PQ96R84 312 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 BDH2Q9BUT1 245 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 PTDSS2Q9BVG9 487 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 SF3B5Q9BWJ5 86 aaKnown RBP7.71□□□□□ -1.17
GPNMB-201ENST00000258733 SLC26A1Q9H2B4 701 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 LDAHQ9H6V9 325 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 RGS18Q9NS28 235 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 TMEM9Q9P0T7 183 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 CDH9Q9ULB4 789 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 POLIQ9UNA4 740 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 LIPT1Q9Y234 373 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 ITSN1Q15811 1721 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 CIB4A0PJX0 185 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 POM121BA6NF01 834 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 ANKDD1BA6NHY2 528 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 IRAK2O43187 625 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 SLC25A17O43808 307 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 DIRAS3O95661 229 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 DLGAP3O95886 979 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 IFNA4P05014 189 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 CLTBP09497 229 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 OR4E1P0C645 316 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 NELFEP18615 380 aaKnown RBP7.71□□□□□ -1.18
GPNMB-201ENST00000258733 CHRM3P20309 590 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 SLC7A1P30825 629 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 PRKAA2P54646 552 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 NRLP54845 237 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 MLLT10P55197 1068 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 HERVK_113P63132 956 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 INPP5AQ14642 412 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 SMCO1Q147U7 214 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 MAPK11Q15759 364 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 KIAA1755Q5JYT7 1200 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 GPR107Q5VW38 600 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 JADE1Q6IE81 842 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 RRAGAQ7L523 313 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 FAM122BQ7Z309 247 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 R3HCC1LQ7Z5L2 792 aaKnown RBP7.71□□□□□ -1.18
GPNMB-201ENST00000258733 MTDHQ86UE4 582 aaKnown RBP7.71□□□□□ -1.18
GPNMB-201ENST00000258733 NT5DC3Q86UY8 548 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 CCDC103Q8IW40 242 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 MCOLN2Q8IZK6 566 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 ZDHHC14Q8IZN3 488 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 C12orf29Q8N999 325 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 WFIKKN2Q8TEU8 576 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 SLC20A1Q8WUM9 679 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 USP7Q93009 1102 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 MRPL37Q9BZE1 423 aaKnown RBP7.71□□□□□ -1.18
GPNMB-201ENST00000258733 WWP1Q9H0M0 922 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 BLZF1Q9H2G9 400 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 RIBC2Q9H4K1 309 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 PRDM5Q9NQX1 630 aaPredicted RBP7.71□□□□□ -1.18
GPNMB-201ENST00000258733 BIN3Q9NQY0 253 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 BABAM2Q9NXR7 383 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 UBE4BO95155 1302 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 MN1Q10571 1320 aaPredicted RBP7.71□□□□□ -1.18
GPNMB-201ENST00000258733 ANKARQ7Z5J8 1434 aa7.71□□□□□ -1.18
GPNMB-201ENST00000258733 A0A0A0MRY4 1105 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 RRN3P2A6NIE6 340 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 RHPN2P1A8MT19 583 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 F5H423 210 aaPredicted RBP7.7□□□□□ -1.18
GPNMB-201ENST00000258733 C2CD2LO14523 706 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 MATN3O15232 486 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 AMHP03971 560 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 CNPP09543 421 aaKnown RBP7.7□□□□□ -1.18
GPNMB-201ENST00000258733 ERVK-10P10266 1014 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 BMP1P13497 986 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 KRT15P19012 456 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 MSX1P28360 303 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 EEF1DP29692 281 aaKnown RBP7.7□□□□□ -1.18
GPNMB-201ENST00000258733 CDC25AP30304 524 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 SSTR3P32745 418 aaPredicted RBP7.7□□□□□ -1.18
GPNMB-201ENST00000258733 YAP1P46937 504 aaKnown RBP7.7□□□□□ -1.18
GPNMB-201ENST00000258733 NT5C2P49902 561 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 IKBKEQ14164 716 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 SMAD1Q15797 465 aaKnown RBP7.7□□□□□ -1.18
GPNMB-201ENST00000258733 DUSP6Q16828 381 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 MEDAGQ5VYS4 303 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 ETFRF1Q6IPR1 90 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 DPY19L2P1Q6NXN4 242 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 SLC36A4Q6YBV0 504 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 USP45Q70EL2 814 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 SLC26A9Q7LBE3 791 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 MON1AQ86VX9 555 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 OR4M1Q8NGD0 313 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 OR5T2Q8NGG2 359 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 BAP1Q92560 729 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 NR4A3Q92570 626 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 ST6GAL2Q96JF0 529 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 KCNH6Q9H252 994 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 LRRC40Q9H9A6 602 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 AKIP1Q9NQ31 210 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 KLHL1Q9NR64 748 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 EXD2Q9NVH0 621 aa7.7□□□□□ -1.18
GPNMB-201ENST00000258733 SRRDQ9UH36 339 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms