RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 TRAP1Q12931 704 aaKnown RBP4.71□□□□□ -1.65
USP44-201ENST00000258499 LAPTM5Q13571 262 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 RFTN1Q14699 578 aaPredicted RBP4.71□□□□□ -1.65
USP44-201ENST00000258499 NR1D2Q14995 579 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 CPSF6Q16630 551 aaKnown RBP eCLIP4.71□□□□□ -1.65
USP44-201ENST00000258499 MAPKAPK3Q16644 382 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 AP5B1Q2VPB7 878 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 MFSD14CQ5VZR4 134 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 AGMOQ6ZNB7 445 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 FAM43BQ6ZT52 329 aaPredicted RBP4.71□□□□□ -1.65
USP44-201ENST00000258499 ISCA2Q86U28 154 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 RETREG3Q86VR2 466 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 DENND1CQ8IV53 801 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 ARHGAP12Q8IWW6 846 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 MICU2Q8IYU8 434 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 TBC1D21Q8IYX1 336 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 C8orf59Q8N0T1 100 aaPredicted RBP4.71□□□□□ -1.65
USP44-201ENST00000258499 CARNMT1Q8N4J0 409 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 FAM110BQ8TC76 370 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 RSPH1Q8WYR4 309 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 IRGQQ8WZA9 623 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 ROPN1LQ96C74 230 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 OSBPL6Q9BZF3 934 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 RIBC2Q9H4K1 309 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 PARVBQ9HBI1 364 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 DNAAF2Q9NVR5 837 aaKnown RBP4.71□□□□□ -1.65
USP44-201ENST00000258499 SEPT3Q9UH03 358 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 DAPK2Q9UIK4 370 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 VPS28Q9UK41 221 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 INVSQ9Y283 1065 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 PCDHB9Q9Y5E1 797 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 ACTL7AQ9Y615 435 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 COL11A2P13942 1736 aaPredicted RBP4.71□□□□□ -1.66
USP44-201ENST00000258499 IQCA1LA6NCM1 817 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 B4GAT1O43505 415 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 ECI2O75521 394 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 LRATO95237 230 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 AKR1A1P14550 325 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 ZNF26P17031 533 aaPredicted RBP4.71□□□□□ -1.66
USP44-201ENST00000258499 ARNTP27540 789 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 PBX3P40426 434 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 MTHFRP42898 656 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 ARCN1P48444 511 aaKnown RBP4.71□□□□□ -1.66
USP44-201ENST00000258499 CLK1P49759 484 aaKnown RBP4.71□□□□□ -1.66
USP44-201ENST00000258499 CDK9P50750 372 aaKnown RBP4.71□□□□□ -1.66
USP44-201ENST00000258499 INHBCP55103 352 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 DNAJB13P59910 316 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 RPS24P62847 133 aaKnown RBP4.71□□□□□ -1.66
USP44-201ENST00000258499 SEMG2Q02383 582 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 DUSP4Q13115 394 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 LRP8Q14114 963 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 GRM2Q14416 872 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 FAM110CQ1W6H9 321 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 PM20D1Q6GTS8 502 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 GALNT18Q6P9A2 607 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 GALNT5Q7Z7M9 940 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 LRRC49Q8IUZ0 686 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 CMTR2Q8IYT2 770 aaKnown RBP4.71□□□□□ -1.66
USP44-201ENST00000258499 LINC01465Q8N7H1 131 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 TMEM102Q8N9M5 508 aaPredicted RBP4.71□□□□□ -1.66
USP44-201ENST00000258499 TRPV3Q8NET8 790 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 OR10A6Q8NH74 314 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 NT5C3BQ969T7 300 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 CDKN2AIPNLQ96HQ2 116 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 SMIM14Q96QK8 99 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 IL12RB2Q99665 862 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 MEAF6Q9HAF1 191 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 NMRK2Q9NPI5 230 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 INTS7Q9NVH2 962 aaKnown RBP4.71□□□□□ -1.66
USP44-201ENST00000258499 PLK2Q9NYY3 685 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 SELENONQ9NZV5 590 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 FKBPLQ9UIM3 349 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 RNF11Q9Y3C5 154 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 LOXHD1Q8IVV2 1947 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 FOCADQ5VW36 1801 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 LRRC37AA6NMS7 1700 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 A0A0J9YVX5 310 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 AQP12BA6NM10 295 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 CFAP99D6REC4 459 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 GABRDO14764 452 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 KPNA6O60684 536 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 ATP6V1G1O75348 118 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 MLYCDO95822 493 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 S1PR4O95977 384 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 ALDOCP09972 364 aaKnown RBP4.71□□□□□ -1.66
USP44-201ENST00000258499 PKMP14618 531 aaKnown RBP4.71□□□□□ -1.66
USP44-201ENST00000258499 ZNF37AP17032 561 aaPredicted RBP4.71□□□□□ -1.66
USP44-201ENST00000258499 UGT1A1P22309 533 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 UGT1A4P22310 534 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 ELK4P28324 431 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 PRDX3P30048 256 aaKnown RBP4.71□□□□□ -1.66
USP44-201ENST00000258499 UGT1A3P35503 534 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 UGT1A5P35504 534 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 CAPGP40121 348 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 MAGEA12P43365 314 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 HSPA7P48741 367 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 CCT8P50990 548 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 APLP1P51693 650 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 IST1P53990 364 aa4.71□□□□□ -1.66
USP44-201ENST00000258499 RPL26P61254 145 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms