RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TLX3O43711 291 aaPredicted RBP13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 COQ9O75208 318 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 RECQL5O94762 991 aaPredicted RBP13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 PECAM1P16284 738 aaPredicted RBP13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 GABRB2P47870 512 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 MRPS15P82914 257 aaKnown RBP13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 NR1D2Q14995 579 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 PLXDC1Q8IUK5 500 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 HDAC10Q969S8 669 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 NSL1Q96IY1 281 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 TNKS2Q9H2K2 1166 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 ATXN2Q99700 1313 aaKnown RBP13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 TTLL8A6PVC2 850 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 H3BNC9 293 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 SEC31AO94979 1220 aaKnown RBP13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 CDH5P33151 784 aaPredicted RBP13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 CCR8P51685 355 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 ABATP80404 500 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 PLEKHG6Q3KR16 790 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 CLEC4FQ8N1N0 589 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 OR4K2Q8NGD2 314 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 BAP1Q92560 729 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 C2orf74A8MZ97 194 aa13.33□□□□□ -0.27
PRPF38A-201ENST00000257181 TCP11X1B4DZS4 312 aa13.33□□□□□ -0.27
PRPF38A-201ENST00000257181 PRAMEF26H0Y7S4 382 aa13.33□□□□□ -0.27
PRPF38A-201ENST00000257181 ZNF185O15231 689 aa13.33□□□□□ -0.27
PRPF38A-201ENST00000257181 TEX9Q8N6V9 391 aa13.33□□□□□ -0.27
PRPF38A-201ENST00000257181 OR52L1Q8NGH7 329 aa13.33□□□□□ -0.27
PRPF38A-201ENST00000257181 OTULINQ96BN8 352 aa13.33□□□□□ -0.27
PRPF38A-201ENST00000257181 PPCDCQ96CD2 204 aa13.33□□□□□ -0.27
PRPF38A-201ENST00000257181 MYOCQ99972 504 aa13.33□□□□□ -0.27
PRPF38A-201ENST00000257181 TBCDQ9BTW9 1192 aa13.33□□□□□ -0.27
PRPF38A-201ENST00000257181 EBF3Q9H4W6 596 aa13.33□□□□□ -0.27
PRPF38A-201ENST00000257181 PCDHGA11Q9Y5H2 935 aa13.33□□□□□ -0.27
PRPF38A-201ENST00000257181 DNMT3AQ9Y6K1 912 aaPredicted RBP13.33□□□□□ -0.27
PRPF38A-201ENST00000257181 PRPF38BQ5VTL8 546 aaKnown RBP13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 C1orf53Q5VUE5 145 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 DLK2Q6UY11 383 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 GDPD5Q8WTR4 605 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 KLHL6Q8WZ60 621 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 SCOCQ9UIL1 159 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 TCF3P15923 654 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 LMO2P25791 158 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 RAD23AP54725 363 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 LGALS3BPQ08380 585 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 NR0B2Q15466 257 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 TAF13Q15543 124 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 FAM98BQ52LJ0 330 aaKnown RBP13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 CMASQ8NFW8 434 aaPredicted RBP13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 KAT5Q92993 513 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 ITCHQ96J02 903 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 SLC12A4Q9UP95 1085 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 E2F1Q01094 437 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 OVGP1Q12889 678 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 TRIM32Q13049 653 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 TEKT5Q96M29 485 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 SERINC1Q9NRX5 453 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 ERVK-11Q9UQG0 969 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 A8MX80 341 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 FLOT2Q14254 428 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 FNBP1LQ5T0N5 605 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 ERICH5Q6P6B1 374 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 SERPINA9Q86WD7 417 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 CFAP206Q8IYR0 622 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 CHCHD4Q8N4Q1 142 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 TRAM1L1Q8N609 369 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 RBM18Q96H35 190 aaKnown RBP13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 RMDN2Q96LZ7 410 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 BPIFA1Q9NP55 256 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 LIMD1Q9UGP4 676 aa13.33□□□□□ -0.28
PRPF38A-201ENST00000257181 YJEFN3A6XGL0 299 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 E7ENQ6 273 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 SESN3P58005 492 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 RPS15P62841 145 aaKnown RBP13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 SQLEQ14534 574 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 LRRC26Q2I0M4 334 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 IRF2BP2Q7Z5L9 587 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 SEC14L1Q92503 715 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 KCNK4Q9NYG8 393 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 SLC16A5O15375 505 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 STK16O75716 305 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 PPP1R37O75864 691 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 SEMA4FO95754 770 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 ALPPP05187 535 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 CCDC166P0CW27 439 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 PIK3R1P27986 724 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 CCKBRP32239 447 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 CNR2P34972 360 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 RPL14P50914 215 aaKnown RBP13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 SLC7A9P82251 487 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 ACY1Q03154 408 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 FBXL22Q6P050 247 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 SLC35F5Q8WV83 523 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 TAPBPLQ9BX59 468 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 NECTIN3Q9NQS3 549 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 GPR34Q9UPC5 381 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 ZNF840PA6NDX5 716 aa13.32□□□□□ -0.28
PRPF38A-201ENST00000257181 PRAMEF11O60813 436 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms