RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 A0A087WZ62 844 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 CAPN5O15484 640 aaPredicted RBP11.77□□□□□ -0.53
CCNA1-201ENST00000255465 MICAL2O94851 1124 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 SEMA3DO95025 777 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 SEC24AO95486 1093 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 ALBP02768 609 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 ARCN1P48444 511 aaKnown RBP11.77□□□□□ -0.53
CCNA1-201ENST00000255465 IDH3AP50213 366 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 WDR5P61964 334 aaKnown RBP11.77□□□□□ -0.53
CCNA1-201ENST00000255465 RPP38P78345 283 aaKnown RBP11.77□□□□□ -0.53
CCNA1-201ENST00000255465 TEKQ02763 1124 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 KLF1Q13351 362 aaPredicted RBP11.77□□□□□ -0.53
CCNA1-201ENST00000255465 TAF12Q16514 161 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 TMEM119Q4V9L6 283 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 ANKRD39Q53RE8 183 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 PAGE2BQ5JRK9 111 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 SLC9A4Q6AI14 798 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 FAM109BQ6ICB4 259 aaPredicted RBP11.77□□□□□ -0.53
CCNA1-201ENST00000255465 SLC16A12Q6ZSM3 486 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 GPALPP1Q8IXQ4 340 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 TCTE3Q8IZS6 198 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 OR8K3Q8NH51 312 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 PTP4A1Q93096 173 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 KLHL32Q96NJ5 620 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 MOGAT1Q96PD6 335 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 KCTD14Q9BQ13 255 aaPredicted RBP11.77□□□□□ -0.53
CCNA1-201ENST00000255465 EBF4Q9BQW3 602 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 FDXACB1Q9BRP7 624 aaPredicted RBP11.77□□□□□ -0.53
CCNA1-201ENST00000255465 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.77□□□□□ -0.53
CCNA1-201ENST00000255465 LHX5Q9H2C1 402 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 MMP27Q9H306 513 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 DSN1Q9H410 356 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 IFT46Q9NQC8 304 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 TMEM216Q9P0N5 145 aa11.77□□□□□ -0.53
CCNA1-201ENST00000255465 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 SOX1O00570 391 aaPredicted RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 TLL1O43897 1013 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 EFCAB14O75071 495 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 KCNH1O95259 989 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 DARSP14868 501 aaKnown RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 NELFEP18615 380 aaKnown RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 MMP8P22894 467 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 UQCRC1P31930 480 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 ARL2P36404 184 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 RECQLP46063 649 aaPredicted RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 PLA2G16P53816 162 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 LAMTOR4Q0VGL1 99 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 NFX1Q12986 1120 aaKnown RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 MXD4Q14582 209 aaPredicted RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 HIF1AQ16665 826 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 C6orf132Q5T0Z8 1188 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 XAF1Q6GPH4 301 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 SHQ1Q6PI26 577 aaKnown RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 MACC1Q6ZN28 852 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 DPY19L3Q6ZPD9 716 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 CHSY3Q70JA7 882 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 ERMP1Q7Z2K6 904 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 CDH24Q86UP0 819 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 NKAIN4Q8IVV8 208 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 FAM9CQ8IZT9 166 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 EID3Q8N140 333 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 DHRSXQ8N5I4 330 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 MCPH1Q8NEM0 835 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 OR7A2PQ8NGA2 310 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 FOXJ1Q92949 421 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 MUL1Q969V5 352 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 CCDC120Q96HB5 630 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 FUNDC2Q9BWH2 189 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 LHPPQ9H008 270 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 GPRC5CQ9NQ84 441 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 ING3Q9NXR8 418 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 GCNT4Q9P109 453 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 IFT80Q9P2H3 777 aaPredicted RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 ST3GAL5Q9UNP4 418 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 SNX8Q9Y5X2 465 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 MYO9BQ13459 2157 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 EFCAB10A6NFE3 127 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 GRXCR1A8MXD5 290 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 GPR182O15218 404 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 CALUO43852 315 aaPredicted RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 SSX5O60225 188 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 IL18RAPO95256 599 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 FTLP02792 175 aaPredicted RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 INHBAP08476 426 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 HOXD4P09016 255 aaPredicted RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 ZNF30P17039 623 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 ITGB6P18564 788 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 EEF1B2P24534 225 aaKnown RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 CRHR1P34998 444 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 TSPAN7P41732 249 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 TPMTP51580 245 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 MFAP3P55082 362 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 DEFB103AP81534 67 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 PRKCDQ05655 676 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 AQP6Q13520 282 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 TRIM25Q14258 630 aaKnown RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 STARD3Q14849 445 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 CTF1Q16619 201 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 LDLRAP1Q5SW96 308 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms