RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 CRYZL1O95825 349 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 RB1P06400 928 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 CHRM1P11229 460 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 TSPAN8P19075 237 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 STOMP27105 288 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 CRY1Q16526 586 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 BTBD16Q32M84 506 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 LRRC55Q6ZSA7 311 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 USP30Q70CQ3 517 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 GTF3C2Q8WUA4 911 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 PNMA5Q96PV4 448 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZNF347Q96SE7 839 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZNF607Q96SK3 696 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 SAV1Q9H4B6 383 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 TSPAN16Q9UKR8 245 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 MFHAS1Q9Y4C4 1052 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 FADS2P1A8MWK0 482 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 PLIN3O60664 434 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 HLA-DQA2P01906 255 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 CKMT2P17540 419 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 TYMPP19971 482 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 ABL2P42684 1182 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 TBRG1Q3YBR2 411 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 CBWD6Q4V339 395 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 GNASQ5JWF2 1037 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 CMC1Q7Z7K0 106 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 MKL1Q969V6 931 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 FBXO5Q9UKT4 447 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 ENTPD4Q9Y227 616 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 CCNYL3P0C7X3 344 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 PTPN1P18031 435 aaKnown RBP13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 OGNP20774 298 aaKnown RBP13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 CD72P21854 359 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 MGAT5BQ3V5L5 792 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 TMEM119Q4V9L6 283 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 CRTC2Q53ET0 693 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 HECTD3Q5T447 861 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 NOTUMQ6P988 496 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 SCIMPQ6UWF3 145 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 ADGRD2Q7Z7M1 963 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 CIR1Q86X95 450 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 PLCZ1Q86YW0 608 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZNF433Q8N7K0 673 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 OR5J2Q8NH18 312 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 VMP1Q96GC9 406 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 RNF157Q96PX1 679 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 NDUFAF4Q9P032 175 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 MAP10Q9P2G4 905 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 VPS51Q9UID3 782 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 TLL2Q9Y6L7 1015 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 SH3D21A4FU49 640 aa13.08□□□□□ -0.31
PCDHGA3-201ENST00000253812 FABP3P05413 133 aa13.08□□□□□ -0.31
PCDHGA3-201ENST00000253812 CDH13P55290 713 aa13.08□□□□□ -0.31
PCDHGA3-201ENST00000253812 DAG1Q14118 895 aa13.08□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZFP3Q96NJ6 502 aa13.08□□□□□ -0.31
PCDHGA3-201ENST00000253812 RHOJQ9H4E5 214 aa13.08□□□□□ -0.31
PCDHGA3-201ENST00000253812 FAM86B1E9PN63 330 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 M0R036 132 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 PPEF2O14830 753 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 ADAMDEC1O15204 470 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 LDOC1O95751 146 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 NR2F1P10589 423 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 NTSP30990 170 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 RHOAP61586 193 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 FBXO43Q4G163 708 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 REP15Q6BDI9 236 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 OAFQ86UD1 273 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 KIF18BQ86Y91 864 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 CMTR2Q8IYT2 770 aaKnown RBP13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 MAGEB10Q96LZ2 347 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 SEPT5Q99719 369 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 PXMP2Q9NR77 195 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 PHF24Q9UPV7 400 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 FAM86C2PA6NEL3 165 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 LRRC14BA6NHZ5 514 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 WRBO00258 174 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 TNFRSF11BO00300 401 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 AURKAO14965 403 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 OR56A5P0C7T3 313 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 CYP3A5P20815 502 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 AP2S1P53680 142 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 TUBB3Q13509 450 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 RHEBQ15382 184 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 ANXA8L1Q5VT79 327 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 ADNP2Q6IQ32 1131 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 IRF2BP2Q7Z5L9 587 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 FBXO16Q8IX29 292 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 STOML3Q8TAV4 291 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 HDAC10Q969S8 669 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 TRIM43Q96BQ3 446 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 SERAC1Q96JX3 654 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF317Q96PQ6 595 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 ERVK-5Q9HDB9 667 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 SLC39A1Q9NY26 324 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 DNAJB9Q9UBS3 223 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 MALT1Q9UDY8 824 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 ANKDD1BA6NHY2 528 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 RAMP2O60895 175 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 OR2B3O76000 313 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 CCNDBP1O95273 360 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms