RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 PTGESO14684 152 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 PDE9AO76083 593 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 FAM58BPP0C7Q3 252 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 ITGA2P17301 1181 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 ATP6V1C1P21283 382 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 SLC1A2P43004 574 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 VEGFBP49765 207 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 KCNQ1P51787 676 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 CLCQ05315 142 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 TNK2Q07912 1038 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 KLF1Q13351 362 aaPredicted RBP14.9□□□□□ -0.02
UBE4B-201ENST00000253251 WDTC1Q8N5D0 677 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 NMUR1Q9HB89 426 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 CAPN10Q9HC96 672 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 SAGE1Q9NXZ1 904 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 ZNF232Q9UNY5 417 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 TEX264Q9Y6I9 313 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 ABCA3Q99758 1704 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 RASSF9O75901 435 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 BPIFB1Q8TDL5 484 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 NR1H4Q96RI1 486 aaPredicted RBP14.9□□□□□ -0.02
UBE4B-201ENST00000253251 PEBP4Q96S96 227 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 HAPLN2Q9GZV7 340 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 CCDC189A1A4V9 331 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 NRP2O60462 931 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 UQCRBP14927 111 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 MPSTP25325 297 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 KLF10Q13118 480 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 PROSER1Q86XN7 944 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 COLGALT2Q8IYK4 626 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 B4GALNT2Q8NHY0 566 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 RAB11FIP5Q9BXF6 653 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 LRMDAQ9H2I8 198 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 TRIT1Q9H3H1 467 aaKnown RBP14.9□□□□□ -0.02
UBE4B-201ENST00000253251 LRTM1Q9HBL6 345 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 ZDHHC3Q9NYG2 299 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 MRPS33Q9Y291 106 aaKnown RBP14.9□□□□□ -0.02
UBE4B-201ENST00000253251 DNAJA2O60884 412 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 LINC00032P0C843 101 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 USP4Q13107 963 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 ARL13AQ5H913 290 aaPredicted RBP14.9□□□□□ -0.02
UBE4B-201ENST00000253251 PPM1JQ5JR12 505 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 UBXN11Q5T124 520 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 ATXN7L2Q5T6C5 722 aaPredicted RBP14.9□□□□□ -0.02
UBE4B-201ENST00000253251 TRMT10BQ6PF06 316 aaKnown RBP14.9□□□□□ -0.02
UBE4B-201ENST00000253251 GATA5Q9BWX5 397 aaPredicted RBP14.9□□□□□ -0.02
UBE4B-201ENST00000253251 REEP1Q9H902 201 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 CD248Q9HCU0 757 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 DNAJB4Q9UDY4 337 aa14.9□□□□□ -0.02
UBE4B-201ENST00000253251 EDDM13A0A1B0GTR0 161 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 CCDC162PA2VCL2 907 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 HCRTO43612 131 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 WFS1O76024 890 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 RB1P06400 928 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 GPR141Q7Z602 305 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 ZNF276Q8N554 614 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 C10orf53Q8N6V4 93 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 OR14C36Q8NHC7 312 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 RAD51AP1Q96B01 352 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 CDKN2AIPNLQ96HQ2 116 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 TUBGCP5Q96RT8 1024 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 TELO2Q9Y4R8 837 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 HEBP2Q9Y5Z4 205 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 CNPP09543 421 aaKnown RBP14.89□□□□□ -0.03
UBE4B-201ENST00000253251 RFX3P48380 749 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 SLC25A3Q00325 362 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 LACTB2Q53H82 288 aaPredicted RBP14.89□□□□□ -0.03
UBE4B-201ENST00000253251 TMC5Q6UXY8 1006 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 TIFABQ6ZNK6 161 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 CLNKQ7Z7G1 428 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 FSTL5Q8N475 847 aaPredicted RBP14.89□□□□□ -0.03
UBE4B-201ENST00000253251 KBTBD7Q8WVZ9 684 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 PTPN18Q99952 460 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 ZSCAN5AQ9BUG6 496 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 C8orf4Q9NR00 106 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 NDOR1Q9UHB4 597 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 KLHL20Q9Y2M5 609 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 WNT9AO14904 365 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 CNOT3O75175 753 aaKnown RBP14.89□□□□□ -0.03
UBE4B-201ENST00000253251 DHRSXQ8N5I4 330 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 BHLHE22Q8NFJ8 381 aaPredicted RBP14.89□□□□□ -0.03
UBE4B-201ENST00000253251 HERVK_113Q902F9 699 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 MAGED4Q96JG8 741 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 IPPKQ9H8X2 491 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 IL36AQ9UHA7 158 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 MAGEL2Q9UJ55 1249 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 INPPL1O15357 1258 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 PRKCHP24723 683 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 C21orf59P57076 290 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 UBE3AQ05086 875 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 ILF3Q12906 894 aaKnown RBP eCLIP14.89□□□□□ -0.033e-6■□□□□ 8.7
UBE4B-201ENST00000253251 RFTN2Q52LD8 501 aaPredicted RBP14.89□□□□□ -0.03
UBE4B-201ENST00000253251 SIRPB2Q5JXA9 342 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 MICU2Q8IYU8 434 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 RNF168Q8IYW5 571 aaPredicted RBP14.89□□□□□ -0.03
UBE4B-201ENST00000253251 SVOPQ8N4V2 548 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 TWIST2Q8WVJ9 160 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 POF1BQ8WVV4 589 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 TMEM40Q8WWA1 233 aa14.89□□□□□ -0.03
UBE4B-201ENST00000253251 AUTS2Q8WXX7 1259 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms