RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 CPSF6Q16630 551 aaKnown RBP eCLIP8.62□□□□□ -1.03
USP6-201ENST00000250066 PITRM1Q5JRX3 1037 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 FBXO47Q5MNV8 452 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 UBXN11Q5T124 520 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 DCST1Q5T197 706 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 KLHL35Q6PF15 583 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 SEPT12Q8IYM1 358 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 PM20D2Q8IYS1 436 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 TREX2Q9BQ50 279 aaPredicted RBP8.62□□□□□ -1.03
USP6-201ENST00000250066 MCMBPQ9BTE3 642 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 IRF2BPLQ9H1B7 796 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 RGCCQ9H4X1 137 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 ATP13A3Q9H7F0 1226 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 OSGEPQ9NPF4 335 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 PLEKHG2Q9H7P9 1386 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 TMEM2Q9UHN6 1383 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 FXYD6-FXYD2A0A087WZ82 144 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 C13orf42A0A1B0GVH6 325 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 HSPA12AO43301 675 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 CPNE3O75131 537 aaKnown RBP8.62□□□□□ -1.03
USP6-201ENST00000250066 UNC5CO95185 931 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 YES1P07947 543 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 LINC00032P0C843 101 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 CHMP24386 653 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 CCR3P51677 355 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 ALX1Q15699 326 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 SNAP47Q5SQN1 464 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 C6orf183Q5T699 404 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 XRRA1Q6P2D8 792 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 MPZL3Q6UWV2 235 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 DNAAF1Q8NEP3 725 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 NSMCE3Q96MG7 304 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 OR5B12Q96R08 314 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 FXYD6Q9H0Q3 95 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 HMGXB4Q9UGU5 601 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 BARX2Q9UMQ3 279 aaPredicted RBP8.62□□□□□ -1.03
USP6-201ENST00000250066 AP1M2Q9Y6Q5 423 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 GRIN2DO15399 1336 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 A0A0G2JMP0 313 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 SLC35G4P0C7Q5 338 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 MAGEA11P43364 429 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 PTPN11Q06124 597 aaPredicted RBP8.62□□□□□ -1.03
USP6-201ENST00000250066 PPP3CAQ08209 521 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 ZNF844Q08AG5 666 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 SREBF2Q12772 1141 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 SF1Q15637 639 aaKnown RBP8.62□□□□□ -1.03
USP6-201ENST00000250066 AARDQ4LEZ3 155 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 LIPMQ5VYY2 423 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 SMARCD3Q6STE5 483 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 CLIP4Q8N3C7 705 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 OR4M2Q8NGB6 313 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 TAMM41Q96BW9 452 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 HSPA12BQ96MM6 686 aa8.62□□□□□ -1.03
USP6-201ENST00000250066 NPC1L1Q9UHC9 1359 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 ZNF705EA8MWA4 302 aaPredicted RBP8.61□□□□□ -1.03
USP6-201ENST00000250066 H3BUI4 141 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 SERPINA6P08185 405 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 ZNF20P17024 532 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 VAMP1P23763 118 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 ACSL1P33121 698 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 IFI35P80217 286 aaPredicted RBP8.61□□□□□ -1.03
USP6-201ENST00000250066 PUM1Q14671 1186 aaKnown RBP eCLIP8.61□□□□□ -1.03
USP6-201ENST00000250066 MAD2L1BPQ15013 274 aaPredicted RBP8.61□□□□□ -1.03
USP6-201ENST00000250066 OR14K1Q8NGZ2 314 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 RIT1Q92963 219 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 VAT1Q99536 393 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 KCNH7Q9NS40 1196 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 RIMKLBQ9ULI2 386 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 ERVK-11Q9UQG0 969 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 CLTCQ00610 1675 aaKnown RBP8.61□□□□□ -1.03
USP6-201ENST00000250066 EVPLQ92817 2033 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 CABYRO75952 493 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 RASGRP1O95267 797 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 PEPDP12955 493 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 ZNF16P17020 682 aaPredicted RBP8.61□□□□□ -1.03
USP6-201ENST00000250066 SLC6A4P31645 630 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 OR6K6Q8NGW6 343 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 HEXDCQ8WVB3 486 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 SMARCD2Q92925 531 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 SLC7A6OSQ96CW6 309 aaPredicted RBP8.61□□□□□ -1.03
USP6-201ENST00000250066 STRA6Q9BX79 667 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 SLC22A4Q9H015 551 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 BRD9Q9H8M2 597 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 LYARQ9NX58 379 aaKnown RBP8.61□□□□□ -1.03
USP6-201ENST00000250066 WASHC1A8K0Z3 465 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 WASH3PC4AMC7 463 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 POMCP01189 267 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 PET100P0DJ07 73 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 SSR2P43308 183 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 BATFQ16520 125 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 UBAP2Q5T6F2 1119 aaKnown RBP8.61□□□□□ -1.03
USP6-201ENST00000250066 PPP1R26Q5T8A7 1209 aaPredicted RBP8.61□□□□□ -1.03
USP6-201ENST00000250066 KCNT2Q6UVM3 1135 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 WASH2PQ6VEQ5 465 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 VTCN1Q7Z7D3 282 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 P2RY8Q86VZ1 359 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 CRYBG2Q8N1P7 616 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 PTGR2Q8N8N7 351 aaPredicted RBP8.61□□□□□ -1.03
USP6-201ENST00000250066 OR2AJ1Q8NGZ0 328 aa8.61□□□□□ -1.03
USP6-201ENST00000250066 SLC5A5Q92911 643 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms