RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 DIO3P55073 304 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 USP41Q3LFD5 358 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 ZRANB3Q5FWF4 1079 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 SYVN1Q86TM6 617 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 LRRC43Q8N309 656 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 TTC30BQ8N4P2 665 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 NKAPQ8N5F7 415 aaKnown RBP19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 CD200R1Q8TD46 325 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 EEF1AKMT1Q8WVE0 214 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 DUS3LQ96G46 650 aaKnown RBP19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 CEP295NLQ96MC4 621 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 CLSTN3Q9BQT9 956 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 SPATA16Q9BXB7 569 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 KLF16Q9BXK1 252 aaPredicted RBP19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 ADGRE3Q9BY15 652 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 TRPM5Q9NZQ8 1165 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 PCTPQ9UKL6 214 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 SYCE1LA8MT33 242 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 FXYD1O00168 92 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 VPS26AO75436 327 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 CHRM3P20309 590 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 CES1P23141 567 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 MZF1P28698 734 aaPredicted RBP19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 SLC7A1P30825 629 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 TTPAP49638 278 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 POLE2P56282 527 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 CNPY1Q3B7I2 92 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 FAM110BQ8TC76 370 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 EME1Q96AY2 570 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 C1QTNF3Q9BXJ4 246 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 SLC52A3Q9NQ40 469 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 CNOT11Q9UKZ1 510 aaKnown RBP19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 NDUFAF1Q9Y375 327 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 STX16O14662 325 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 STX7O15400 261 aaKnown RBP19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 MATN4O95460 622 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 ATP6V1B2P21281 511 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 ALDH7A1P49419 539 aaKnown RBP19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 NOGQ13253 232 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 PLD1Q13393 1074 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 NRF1Q16656 503 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 HMBOX1Q6NT76 420 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 NCEH1Q6PIU2 408 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 SLC30A9Q6PML9 568 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 DHFR2Q86XF0 187 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 RIN3Q8TB24 985 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 COQ10BQ9H8M1 238 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 SMPD4Q9NXE4 827 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 ABCD2Q9UBJ2 740 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 LHX3Q9UBR4 397 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 TRMT6Q9UJA5 497 aaKnown RBP19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 GPR45Q9Y5Y3 372 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 BACE2Q9Y5Z0 518 aa19.38■□□□□ 0.69
CDC42EP1-201ENST00000249014 C7orf72A4D263 438 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 CRCPO75575 148 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 PGM3O95394 542 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 PRAMEF12O95522 483 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 PABPC4LP0CB38 370 aaKnown RBP19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 PRR35P0CG20 571 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 MYBPC1Q00872 1141 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 CAPRIN1Q14444 709 aaKnown RBP19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 SATL1Q86VE3 508 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 SLC15A3Q8IY34 581 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 CPNE9Q8IYJ1 553 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 RNF168Q8IYW5 571 aaPredicted RBP19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 EID2BQ96D98 161 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 LINGO1Q96FE5 620 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 TEX37Q96LM6 180 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 MYRFLQ96LU7 910 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 AFF4Q9UHB7 1163 aaKnown RBP19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 VPS9D1Q9Y2B5 631 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 SNX13Q9Y5W8 968 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 PLXNA4Q9HCM2 1894 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 ZNF839A8K0R7 811 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 IQCF5A8MTL0 148 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 ANGPT2O15123 496 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 MTX3Q5HYI7 312 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 BLOC1S3Q6QNY0 202 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 SCIMPQ6UWF3 145 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 AMIGO2Q86SJ2 522 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 GALNT15Q8N3T1 639 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 UHRF1Q96T88 793 aaPredicted RBP19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 HOPXQ9BPY8 73 aaPredicted RBP19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 APPL1Q9UKG1 709 aa19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 CNOT6Q9ULM6 557 aaKnown RBP19.37■□□□□ 0.69
CDC42EP1-201ENST00000249014 PITPNM1O00562 1244 aa19.36■□□□□ 0.69
CDC42EP1-201ENST00000249014 ESRRBO95718 433 aa19.36■□□□□ 0.69
CDC42EP1-201ENST00000249014 IDO1P14902 403 aa19.36■□□□□ 0.69
CDC42EP1-201ENST00000249014 GRIA3P42263 894 aa19.36■□□□□ 0.69
CDC42EP1-201ENST00000249014 HSPA13P48723 471 aa19.36■□□□□ 0.69
CDC42EP1-201ENST00000249014 IL2P60568 153 aa19.36■□□□□ 0.69
CDC42EP1-201ENST00000249014 IRX1P78414 480 aaPredicted RBP19.36■□□□□ 0.69
CDC42EP1-201ENST00000249014 TWF1Q12792 350 aa19.36■□□□□ 0.69
CDC42EP1-201ENST00000249014 MAP7D1Q3KQU3 841 aa19.36■□□□□ 0.69
CDC42EP1-201ENST00000249014 OGFOD2Q6N063 350 aa19.36■□□□□ 0.69
CDC42EP1-201ENST00000249014 CARNMT1Q8N4J0 409 aa19.36■□□□□ 0.69
CDC42EP1-201ENST00000249014 MINDY1Q8N5J2 469 aa19.36■□□□□ 0.69
CDC42EP1-201ENST00000249014 ZNF461Q8TAF7 563 aa19.36■□□□□ 0.69
CDC42EP1-201ENST00000249014 PLEKHG4BQ96PX9 1271 aa19.36■□□□□ 0.69
CDC42EP1-201ENST00000249014 ACOX2Q99424 681 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms